Genome sequence data availability
for the Japanese Red Lists
Updated on 2024-10-01
This page shows only entries from the "Other invertebrates" Red List section. This table is also available in TSV format.
This page shows only entries from the "Other invertebrates" Red List section. This table is also available in TSV format.
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| EX 絶滅 | Compressalges nipponiae トキウモウダニ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| EN 絶滅危惧IB類 | Haemaphy salispentalagi クロウサギチマダニ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 4 | 37 | 1/124 (0.8%) | 17/796 (2.1%) | — |
| EN 絶滅危惧IB類 | Pyatakovestia boninensis オガサワラホソハマトビムシ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/3 (0.0%) | 4/279 (1.4%) | — |
| CR+EN 絶滅危惧I類 | Bdellocephala annandalei ビワオオウズムシ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/10 (0.0%) | 0/51 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Dendrocoelopsis kishidai キョウトウズムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/4 (0.0%) | 0/51 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Dugesia izuensis イズウズムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 8 | 1/259 (0.4%) | 4/338 (1.2%) | — |
| CR+EN 絶滅危惧I類 | Ectoplana limuli カブトガニウズムシ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/10 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Phagocata papillifera カントウイドウズムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/17 (0.0%) | 0/37 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Cirrodrilus tsugarensis ツガルザリガニミミズ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/39 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Tachypleus tridentatus カブトガニ | EN | ✓ | ✓ | ✓ | ✓ | Yes (4) | Chromosome, Reference | 2.17 Gbp 50.0x | 7,577 1.64 Mbp | 4 | 5 | 8 | 2/4 (50.0%) | 4/9 (44.4%) | 2019-01-22 |
| CR+EN 絶滅危惧I類 | Cordiseta nakayamai ナカヤマタマツツガムシ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR+EN 絶滅危惧I類 | Walchia pentalagi クロウサギワルヒツツガムシ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 2 | 0/14 (0.0%) | 2/122 (1.6%) | — |
| CR+EN 絶滅危惧I類 | Cybaeus itsukiensis イツキメナシナミハグモ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/60 (0.0%) | 0/72 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Salmincola stellatus イトウナガクビムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/10 (0.0%) | 0/72 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Gnorimosphaeroma boninense オガサワラコツブムシ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/24 (0.0%) | 0/366 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Hondoniscus kitakamiensis ホンドワラジムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR+EN 絶滅危惧I類 | Amamiku occulta カクレサワガニ | DD | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/498 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Geothelphusa levicervix トカシキオオサワガニ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Geothelphusa miyakoensis ミヤコサワガニ | VU | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Geothelphusa shokitai センカクサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Geothelphusa tenuimanus ヒメユリサワガニ | NT | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| CR+EN 絶滅危惧I類 | Paratya boninensis オガサワラヌマエビ | LC | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/19 (0.0%) | 3/507 (0.6%) | — |
| CR+EN 絶滅危惧I類 | Polyxenus shinoharai シノハラフサヤスデ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/13 (0.0%) | 0/44 (0.0%) | — |
| VU 絶滅危惧II類 | Phagocata albata ソウヤイドウズムシ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/17 (0.0%) | 0/37 (0.0%) | — |
| VU 絶滅危惧II類 | Phagocata suginoi ホクリクホソウズムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/17 (0.0%) | 0/37 (0.0%) | — |
| VU 絶滅危惧II類 | Phagocata tenella ヒダカホソウズムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/17 (0.0%) | 0/37 (0.0%) | — |
| VU 絶滅危惧II類 | Cirrodrilus aomorensis アオモリザリガニミミズ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/39 (0.0%) | — |
| VU 絶滅危惧II類 | Cirrodrilus cirratus カムリザリガニミミズ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/39 (0.0%) | — |
| VU 絶滅危惧II類 | Cirrodrilus ezoensis エゾザリガニミミズ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/39 (0.0%) | — |
| VU 絶滅危惧II類 | Cirrodrilus homodontus ホソザリガニミミズ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/39 (0.0%) | — |
| VU 絶滅危惧II類 | Cirrodrilus inukaii イヌカイザリガニミミズ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/39 (0.0%) | — |
| VU 絶滅危惧II類 | Cirrodrilus iwakiensis イワキザリガニミミズ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/39 (0.0%) | — |
| VU 絶滅危惧II類 | Cirrodrilus makinoi ヒメザリガニミミズ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/39 (0.0%) | — |
| VU 絶滅危惧II類 | Cirrodrilus megalodentatus オオアゴザリガニミミズ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/39 (0.0%) | — |
| VU 絶滅危惧II類 | Cirrodrilus nipponicus ニッポンザリガニミミズ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/39 (0.0%) | — |
| VU 絶滅危惧II類 | Cirrodrilus sapporensis ザリガニミミズ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/39 (0.0%) | — |
| VU 絶滅危惧II類 | Cirrodrilus uchidai ウチダザリガニミミズ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/39 (0.0%) | — |
| VU 絶滅危惧II類 | Parabeloniscus shimojanai クメコシビロザトウムシ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/25 (0.0%) | — |
| VU 絶滅危惧II類 | Aculepeira matsudae マツダタカネオニグモ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/17 (0.0%) | 9/868 (1.0%) | — |
| VU 絶滅危惧II類 | Argyroneta aquatica ミズグモ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/410 (0.0%) | — |
| VU 絶滅危惧II類 | Heptathela kimurai sensu lato キムラグモ（広義） | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/29 (0.0%) | 1/50 (2.0%) | — |
| VU 絶滅危惧II類 | Lycosa ishikariana イソコモリグモ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/44 (0.0%) | 1/584 (0.2%) | — |
| VU 絶滅危惧II類 | Nesticus uenoi フジホラヒメグモ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/70 (0.0%) | 0/195 (0.0%) | — |
| VU 絶滅危惧II類 | Ryuthela nishihirai sensu lato オキナワキムラグモ（広義） | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 3.11 Gbp 39.0x | 2,521 12.9 Mbp | 1 | 1 | 1 | 1/18 (5.6%) | 1/50 (2.0%) | 2024-04-17 |
| VU 絶滅危惧II類 | Amamiku amamensis アマミミナミサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/498 (0.0%) | — |
| VU 絶滅危惧II類 | Antecaridina lauensis ドウクツヌマエビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/4 (0.0%) | 3/507 (0.6%) | — |
| VU 絶滅危惧II類 | Austruca lactea ハクセンシオマネキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/13 (0.0%) | 0/120 (0.0%) | — |
| VU 絶滅危惧II類 | Birgus latro ヤシガニ | VU | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 2.96 Gbp 51.0x | 914,468 5.29 kbp | 1 | 1 | 2 | 1/1 (100.0%) | 2/16 (12.5%) | 2021-05-18 |
| VU 絶滅危惧II類 | Cambaroides japonicus ニホンザリガニ | DD | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/5 (0.0%) | 2/600 (0.3%) | — |
| VU 絶滅危惧II類 | Candidiopotamon kumejimense クメジマミナミサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/6 (0.0%) | 0/498 (0.0%) | — |
| VU 絶滅危惧II類 | Candidiopotamon tokashikense トカシキミナミサワガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/6 (0.0%) | 0/498 (0.0%) | — |
| VU 絶滅危惧II類 | Chiromantes magnus オガサワラクロベンケイガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/6 (0.0%) | 0/273 (0.0%) | — |
| VU 絶滅危惧II類 | Chiromantes ryukyuanum リュウキュウアカテガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/273 (0.0%) | — |
| VU 絶滅危惧II類 | Coenobita perlatus サキシマオカヤドカリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/14 (7.1%) | 2/16 (12.5%) | — |
| VU 絶滅危惧II類 | Eriocheir ogasawaraensis オガサワラモクズガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 5 | 1/5 (20.0%) | 1/116 (0.9%) | — |
| VU 絶滅危惧II類 | Geothelphusa amagui ケラマサワガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| VU 絶滅危惧II類 | Geothelphusa aramotoi アラモトサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| VU 絶滅危惧II類 | Geothelphusa grandiovata オキナワオオサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| VU 絶滅危惧II類 | Geothelphusa iheya イヘヤオオサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| VU 絶滅危惧II類 | Geothelphusa kumejima クメジマオオサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| VU 絶滅危惧II類 | Macrobrachium miyakoense ウリガーテナガエビ | DD | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 4 | 6 | 2/266 (0.8%) | 3/1019 (0.3%) | — |
| VU 絶滅危惧II類 | Macrobrachium placidulum ネッタイテナガエビ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 4 | 6 | 2/266 (0.8%) | 3/1019 (0.3%) | — |
| VU 絶滅危惧II類 | Neocaridina ishigakiensis イシガキヌマエビ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 3 | 1/30 (3.3%) | 3/507 (0.6%) | — |
| VU 絶滅危惧II類 | Palaemon ogasawaraensis オガサワラコテナガエビ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 6 | 1/108 (0.9%) | 3/1019 (0.3%) | — |
| VU 絶滅危惧II類 | Tubuca arcuata シオマネキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/20 (0.0%) | 0/120 (0.0%) | — |
| VU 絶滅危惧II類 | Spirobolus sp. ヤエヤママルヤスデ | — | ✓ | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/8 (0.0%) | 0/23 (0.0%) | — |
| NT 準絶滅危惧 | Stratospongilla clementis ヤワカイメン | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/2 (0.0%) | 3/109 (2.8%) | — |
| NT 準絶滅危惧 | Drawida hattamimizu ハッタミミズ | LC | ✓ | — | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/36 (0.0%) | 0/59 (0.0%) | — |
| NT 準絶滅危惧 | Psathyropus tenuipes ヒトハリザトウムシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/3 (0.0%) | 1/263 (0.4%) | — |
| NT 準絶滅危惧 | Antrodiaetus roretzii カネコトタテグモ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/17 (0.0%) | 0/38 (0.0%) | — |
| NT 準絶滅危惧 | Calommata signata ワスレナグモ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/37 (0.0%) | — |
| NT 準絶滅危惧 | Conothele fragaria キノボリトタテグモ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/83 (0.0%) | 0/236 (0.0%) | — |
| NT 準絶滅危惧 | Latouchia typica キシノウエトタテグモ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/6 (0.0%) | 0/236 (0.0%) | — |
| NT 準絶滅危惧 | Xysticus daisetsuzanus ダイセツカニグモ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/150 (0.0%) | 0/675 (0.0%) | — |
| NT 準絶滅危惧 | Eurydice akiyamai ヒガタスナホリムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/3 (0.0%) | 1/96 (1.0%) | — |
| NT 準絶滅危惧 | Jesogammarus annandalei アナンデールヨコエビ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/20 (0.0%) | 0/46 (0.0%) | — |
| NT 準絶滅危惧 | Jesogammarus naritai ナリタヨコエビ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/20 (0.0%) | 0/46 (0.0%) | — |
| NT 準絶滅危惧 | Paracalliope dichotomus シオカワヨコエビ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/6 (0.0%) | 0/13 (0.0%) | — |
| NT 準絶滅危惧 | Atyoida pilipes ミナミオニヌマエビ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/3 (0.0%) | 3/507 (0.6%) | — |
| NT 準絶滅危惧 | Candidiopotamon okinawense オキナワミナミサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/6 (0.0%) | 0/498 (0.0%) | — |
| NT 準絶滅危惧 | Cardisoma rotundum ヘリトリオカガニ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/4 (0.0%) | 0/20 (0.0%) | — |
| NT 準絶滅危惧 | Caridina prashadi サキシマヌマエビ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 3 | 1/313 (0.3%) | 3/507 (0.6%) | — |
| NT 準絶滅危惧 | Caridina propinqua マングローブヌマエビ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 3 | 1/313 (0.3%) | 3/507 (0.6%) | — |
| NT 準絶滅危惧 | Caridina rubella アシナガヌマエビ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 3 | 1/313 (0.3%) | 3/507 (0.6%) | — |
| NT 準絶滅危惧 | Coenobita brevimanus オオナキオカヤドカリ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Chromosome, Reference | 4.74 Gbp 60.0x | 10,096 1.75 Mbp | 1 | 1 | 2 | 1/14 (7.1%) | 2/16 (12.5%) | 2023-10-17 |
| NT 準絶滅危惧 | Coenobita violascens コムラサキオカヤドカリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/14 (7.1%) | 2/16 (12.5%) | — |
| NT 準絶滅危惧 | Deiratonotus japonicus カワスナガニ | — | ✓ | ✓ | — | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/12 (0.0%) | — |
| NT 準絶滅危惧 | Epigrapsus notatus ヒメオカガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/20 (0.0%) | — |
| NT 準絶滅危惧 | Gaetice ungulatus オキナワヒライソガニ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/3 (0.0%) | 1/116 (0.9%) | — |
| NT 準絶滅危惧 | Gecarcoidea lalandii ムラサキオカガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/20 (0.0%) | — |
| NT 準絶滅危惧 | Geothelphusa exigua ミカゲサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| NT 準絶滅危惧 | Geothelphusa marginata fulva カッショクサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| NT 準絶滅危惧 | Geothelphusa marginata marginata ムラサキサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| NT 準絶滅危惧 | Geothelphusa minei ミネイサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| NT 準絶滅危惧 | Geothelphusa obtusipes リュウキュウサワガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| NT 準絶滅危惧 | Geothelphusa sakamotoana サカモトサワガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/72 (0.0%) | 0/498 (0.0%) | — |
| NT 準絶滅危惧 | Halocaridinides trigonophthalma チカヌマエビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/2 (0.0%) | 3/507 (0.6%) | — |
| NT 準絶滅危惧 | Ilyoplax deschampsi ハラグクレチゴガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/21 (0.0%) | 0/49 (0.0%) | — |
| NT 準絶滅危惧 | Macrobrachium gracilirostre ツブテナガエビ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 4 | 6 | 2/266 (0.8%) | 3/1019 (0.3%) | — |
| NT 準絶滅危惧 | Macrobrachium latidactylus ヒラアシテナガエビ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 4 | 6 | 2/266 (0.8%) | 3/1019 (0.3%) | — |
| NT 準絶滅危惧 | Macrobrachium shokitai ショキタテナガエビ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 4 | 6 | 2/266 (0.8%) | 3/1019 (0.3%) | — |
| NT 準絶滅危惧 | Metabetaeus minutus オハグロテッポウエビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/893 (0.0%) | — |
| NT 準絶滅危惧 | Moguai elongatum コウナガカワスナガニ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| NT 準絶滅危惧 | Neocaridina iriomotensis イリオモテヌマエビ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 3 | 1/30 (3.3%) | 3/507 (0.6%) | — |
| NT 準絶滅危惧 | Neorhynchoplax yaeyamaensis ヤエヤマヤワラガニ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/25 (0.0%) | — |
| NT 準絶滅危惧 | Paramoguai pyriforme ヨウナシカワスナガニ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| NT 準絶滅危惧 | Ptychognathus takahashii ヨツハヒライソモドキ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/23 (0.0%) | 1/116 (0.9%) | — |
| NT 準絶滅危惧 | Ryukyum yaeyamense ヤエヤマヤマガニ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/498 (0.0%) | — |
| DD 情報不足 | Pectispongilla subspinosa ハケカイメン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Radiospongilla hozawai ホウザワカイメン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/5 (0.0%) | 3/109 (2.8%) | — |
| DD 情報不足 | Spongilla inarmata オオツカイメン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 7 | 1/11 (9.1%) | 3/109 (2.8%) | — |
| DD 情報不足 | Stratospongilla akanensis アカンコカイメン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/2 (0.0%) | 3/109 (2.8%) | — |
| DD 情報不足 | Craspedacusta iseana イセマミズクラゲ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/8 (12.5%) | 2/216 (0.9%) | — |
| DD 情報不足 | Ancyrobdella biwae イカリビル | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Ancyrobdella smaragdina ミドリビル | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Hemiclepsis japonica イボビル | — | — | — | — | — | No | — | — | — | 0 | 0 | 1 | 0/9 (0.0%) | 1/293 (0.3%) | — |
| DD 情報不足 | Oligobdella orientalis スクナビル | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 1 | 0/1 (0.0%) | 1/293 (0.3%) | — |
| DD 情報不足 | Oligobdella tagoi タゴビル | — | ✓ | — | — | — | No | — | — | — | 0 | 0 | 1 | 0/2 (0.0%) | 1/293 (0.3%) | — |
| DD 情報不足 | Ozobranchus jantseanus ヌマエラビル | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/4 (0.0%) | — |
| DD 情報不足 | Orobdella yamaneae ヤマネクガビル | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/24 (0.0%) | 0/24 (0.0%) | — |
| DD 情報不足 | Metagoniochernes tomiyamai テナガカニムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Acropsopilio boopis アワマメザトウムシ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/11 (0.0%) | — |
| DD 情報不足 | Himalphalangium spinulatum ゴホントゲザトウムシ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/1 (0.0%) | 2/107 (1.9%) | — |
| DD 情報不足 | Hologagrella minatoi ミナトザトウムシ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Leiobunum rubrum アカスベザトウムシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/155 (0.6%) | 1/263 (0.4%) | — |
| DD 情報不足 | Leiobunum simplum シロウマスベザトウムシ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/155 (0.6%) | 1/263 (0.4%) | — |
| DD 情報不足 | Pygobunus okadai テングザトウムシ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Sabacon distinctus フセブラシザトウムシ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/30 (0.0%) | 0/36 (0.0%) | — |
| DD 情報不足 | Verpulus boninensis ムニンザトウムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Verpulus similis ムニンセグロザトウムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Liacarus latilamellatus アシュウタマゴダニ | — | — | — | ✓ | — | No | — | — | — | 0 | 2 | 3 | 2/40 (5.0%) | 3/159 (1.9%) | — |
| DD 情報不足 | Alopecosa hokkaidensis アシマダラコモリグモ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/43 (0.0%) | 1/584 (0.2%) | — |
| DD 情報不足 | Cladothela boninensis エダイボグモ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/287 (0.0%) | — |
| DD 情報不足 | Desis japonica ヤマトウシオグモ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/62 (0.0%) | — |
| DD 情報不足 | Doosia japonica ドウシグモ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Filistata longibentris ハラナガカヤシマグモ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/6 (0.0%) | 0/95 (0.0%) | — |
| DD 情報不足 | Eubranchipus uchidai キタホウネンエビ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/4 (0.0%) | 0/37 (0.0%) | — |
| DD 情報不足 | Gnorimosphaeroma pulchellum ヒメコツブムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/24 (0.0%) | 0/366 (0.0%) | — |
| DD 情報不足 | Elamenopsis ariakensis アリアケヤワラガニ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Gopkittisak angustum マメイソガニ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/1 (0.0%) | 1/116 (0.9%) | — |
| DD 情報不足 | Karstarma boholano ドウクツベンケイガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/273 (0.0%) | — |
| DD 情報不足 | Lithoselatium pulchrum カスリベンケイガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/273 (0.0%) | — |
| DD 情報不足 | Orcovita miruku ドウクツモクズガニ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Philyra iriomotensis イリオモテマメコブシガニ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/95 (0.0%) | — |
| DD 情報不足 | Philyra kanekoi カネココブシガニ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/95 (0.0%) | — |
| DD 情報不足 | Philyra taekoae アマミマメコブシガニ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/95 (0.0%) | — |
| DD 情報不足 | Tetrias sp. イリオモテヨコナガピンノ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/172 (0.0%) | — |
| DD 情報不足 | Varuna yui タイワンオオヒライソガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/3 (0.0%) | 1/116 (0.9%) | — |
| DD 情報不足 | Xiphonectes brockii ツノナシイボガザミ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 9 | 0/3 (0.0%) | 4/525 (0.8%) | — |
| DD 情報不足 | Epanerchodus acuticlivus リュウオビヤスデ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/11 (0.0%) | 2/82 (2.4%) | — |
| DD 情報不足 | Epanerchodus aster ホシオビヤスデ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/11 (0.0%) | 2/82 (2.4%) | — |
| DD 情報不足 | Cristatella mucedo アユミコケムシ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 574 Mbp 170.0x | 986 4.12 Mbp | 1 | 1 | 1 | 1/1 (100.0%) | 1/1 (100.0%) | 2020-10-23 |