Genome sequence data availability
for the Japanese Red List

Updated on 2026-05-08

Submitters of sequenced genomes (tsv)

PointsNumber of
Red List
entries
Submitter
(List of Red List entries)
29.8334WELLCOME SANGER INSTITUTE
(Anastrepta orcadensis, Andreaea nivalis, Anser erythropus, Blindiadelphus recurvatus, Brachydontium trichodes, Capsula sparganii, Carex rostrata, Cornus suecica, Eleocharis parvula, Epilobium hirsutum, Hadena compta, Laelia coenosa, Leucobryum glaucum, Lycopodium alpinum, Magallana gigas, Moehringia trinervia, Nymphoides peltata, Oedipodium griffithianum, Orthothecium rufescens, Orthotrichum anomalum, Phragmataecia castaneae, Pleurozia purpurea, Potamogeton pectinatus, Potamogeton pusillus, Rhagades pruni, Sphagnum palustre, Tanacetum vulgare var. boreale, Triglochin maritima, Triglochin palustris, Tripolium pannonicum, Umbilicaria deusta, Vespertilio murinus, Zootoca vivipara, Zygodon viridissimus)
17.6722Iridian Genomes
(Aetobatus narinari, Aix galericulata, Anas formosa, Anser erythropus, Atherinomorus duodecimalis, Butastur indicus, Ciconia boyciana, Ellochelon vaigiensis, Fibramia lateralis, Gallinago hardwickii, Hypoatherina temminckii, Lagerstroemia subcostata var. fauriei, Mandarina hirasei, Mandarina suenoae, Mandarina tomiyamai, Rhina ancylostoma, Sphaeramia nematoptera, Tadorna cristata, Tadorna ferruginea, Tadorna tadorna, Thryssa baelama, Yarica hyalosoma)
8.009Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies
(Columba janthina nitens, Fratercula cirrhata, Grus monacha, Grus vipio, Phoebastria albatrus, Pteropus pselaphon, Sapheopipo noguchii, Scolopax mira, Uria aalge inornata)
8.008UNIVERSITY OF CALIFORNIA AT BERKELEY
(Hozukius emblemarius, Hozukius guyotensis, Sebastes alutus, Sebastes baramenuke, Sebastes borealis, Sebastes iracundus, Sebastes oblongus, Sebastesmatsubarae)
7.509BGI Research
(Cyathodium cavernarum, Fissidens javanicus, Orthotrichum anomalum, Pleurozia purpurea, Ricciocarpos natans, Schistostega pennata, Sphagnum palustre, Splachnum ampullaceum, Timmia megapolitana)
6.7510Vertebrate Genomes Project
(Carcharias taurus, Caretta caretta, Dugong dugon, Eretmochelys imbricata, Heptranchias perlo, Manta birostris, Pelodiscus sinensis, Pristiophorus japonicus, Stegostoma fasciatum, Toxotes jaculatrix)
6.507Spribille Lab
(Cornicularia normoerica, Flavocetraria cucullata, Flavopunctelia flaventior, Parmotrema rampoddense, Solorina crocea, Usnea subgracilis, Usnocetraria oakesiana)
4.256Sun Yat-sen University
(Balanophora yakushimensis, Chromileptes altivelis, Epinephelus lanceolatus, Epinephelus tukula, Gecarcoidea lalandii, Lumnitzera racemosa)
3.677Bird 10,000 Genomes (B10K) consortium
(Glareola maldivarum, Histrionicus histrionicu, Locustella lanceolata, Tadorna ferruginea, Tadorna tadorna, Tringa erythropus, Tringa glareola)
3.254Environmental Genomics Office, Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies
(Dugong dugon, Haliaeetus pelagicus, Lagopus muta japonica, Ursus thibetanus japonicus)
3.254The Chinese University of Hong Kong
(Birgus latro, Catalaphyllia jardinei, Platalea minor, Tachypleus tridentatus)
3.007Center for Evolutionary Hologenomics, University of Copenhagen
(Aix galericulata, Anser erythropus, Calidris alpina, Histrionicus histrionicu, Locustella lanceolata, Tadorna tadorna, Tringa erythropus)
3.003Hokkaido University, Graduate School of Life Science
(Tokudaia muenninki, Tokudaia osimensis, Tokudaia tokunoshimensis)
3.004Ocean University of China
(Chromileptes altivelis, Coelomactra antiquata, Littorina brevicula, Ostrea denselamellosa)
2.674Institute of Oceanology, Chinese Academy of Sciences
(Hyporhamphus intermedius, Magallana ariakensis, Magallana gigas, Salanx ariakensis)
2.503Guangdong Ocean University
(Choerodon schoenleinii, Eretmochelys imbricata, Sipunculus nudus)
2.335National Institute for Environmental Studies, Japan
(Aquila chrysaetos japonica, Gallirallus okinawae, Grus japonensis, Prionailurus bengalensis iriomotensis, Pteropus pselaphon)
2.002ChungAng University
(Anguilla bicolor pacifica, Corbicula japonica)
2.002Kyoto University
(Emydocephalus ijimae, Laticauda laticaudata)
2.002Wageningen University and Research
(Asterophora parasitica, Hypsizygus ulmarius)
1.674Laboratory of Ecogenetics, Environmental Biology Division, National Institute for Environmental Studies
(Aquila chrysaetos japonica, Ciconia boyciana, Gallirallus okinawae, Grus japonensis)
1.502Animal Ecology Lab. Zoology Biological Sciences, KYOTO_SC
(Acheilognathus longipinnis, Tachysurus ichikawai)
1.502Atmosphere and Ocean Research Institute, The University of Tokyo
(Acropora echinata, Lamellibrachia satsuma)
1.502BGI-shenzhen
(Boleophthalmus pectinirostris, Scartelaos histophorus)
1.502China Agricultural University
(Anas formosa, Malus hupehensis)
1.502Chinese Academy of Sciences
(Myriophyllum ussuriense, Trapa incisa)
1.502Department of Biology, Osaka Medical and Pharmaceutical University
(Lates japonicus, Tachysurus ichikawai)
1.502Environmental Genomics Office Center for Environmetal Biology and Ecosystem Studies, National Institute for Environmental Studies
(Gorsachius goisagi, Prionailurus bengalensis iriomotensis)
1.502Hong Kong University
(Phoebastria albatrus, Phoebastria immutabilis)
1.502National Marine Biodiversity Institute of Korea
(Lamellibrachia satsuma, Periophthalmus modestus)
1.423DOE Joint Genome Institute
(Boletus edulis, Desarmillaria ectypa, Tricholoma matsutake)
1.332Canada's Genomic Enterprise
(Caretta caretta, Eumetopias jubatus)
1.332Huazhong Agricultural University
(Misgurnus anguillicaudatus, Morchella semilibera)
1.332Senckenberg
(Scintilla philippinensis, Umbilicaria deusta)
1.332University of Helsinki
(Inonotus obliquus, Protomyces pachydermus)
1.332Xiamen University
(Bostrychus sinensis, Egretta eulophotes)
1.332Zhejiang Ocean University
(Bostrychus sinensis, Odontamblyopus lacepedii)
1.263Hunan Agricultural University
(Cyprinus carpio, Pelodiscus sinensis, Pelophylax nigromaculatus)
1.252Zhang Zhang
(Avicennia marina, Sonneratia alba)
1.202The University of Tokyo
(Leucopsarion petersii, Oryzias latipes)
1.172Kazusa DNA Research Institute
(Asparagus kiusianus, Tricholoma matsutake)
1.001Academia Sinica, Taiwan
(Rhyacichthys aspro)
1.001Adam Mickiewicz University
(Eurynorhynchus pygmeus)
1.001Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
(Mantis religiosa)
1.002BGI-Qingdao
(Okamejei kenojei, Verasper variegatus)
1.001Bioinformatics Institute
(Cristatella mucedo)
1.001biology centre, czech academy of sciences
(Cuscuta europaea)
1.001Canada's Genome Enterprise (CGEN)
(Phoca vitulina)
1.001Capital Normal University
(Takakia lepidozioides)
1.001Center for Ecological Research, Kyoto University
(Oncorhynchus masou ishikawae)
1.001Centro Nacional de AnĂ¡lisis GenĂ³mico
(Apodemus agrarius)
1.001Chinese Academy of Agricultural Sciences
(Bombus ignitus)
1.001Chinese Academy of Forestry Research
(Carex myosuroides)
1.001CIIMAR - Interdisciplinary Centre of Marine and Environmental Research
(Harriotta raleighana)
1.001Collage of Life Science
(Aythya baeri)
1.001College of Life Sciences at Wuhan University
(Sparganium angustifolium)
1.001Department of Zoology, Division of Biological Sciences, Graduate School of Science, Kyoto University
(Gymnogobius isaza)
1.001eGnome Inc.
(Orobanche coerulescens)
1.001Ewha Womans University
(Ellobium chinense)
1.001Fairylake Botanical Garden, Shenzhen & Chinese Academy of Sciences
(Monosolenium tenerum)
1.001Fisheries and Oceans Canada
(Oncorhynchus nerka)
1.001Fisheries Resources Institute Japan Fisheries Research and Education Agency
(Atrina japonica)
1.001Florida Museum of Natural History
(Luehdorfia japonica)
1.001GEROMICS
(Bubo bubo)
1.001Guangdong Academy of Agricultural Sciences
(Cymbidium sinense)
1.001Hong Kong University of Science and Technology
(Modiolus philippinarum)
1.001Huanggang Normal University
(Utricularia aurea)
1.001Institute of Hydrobiology, Chinese Academy of Sciences
(Carassius cuvieri)
1.001Institute of Molecular and Cellular Biology SB RAS
(Mustela sibirica)
1.001IRIDIAN GENOMES
(Melanoides tuberculatus)
1.001Kanazawa University
(Chara braunii)
1.001Kunming Institute of Botany, Chinese Academy of Sciences
(Cuscuta australis)
1.001Kyoto City Zoo
(Prionailurus bengalensis euptilurus)
1.001LOEWE Centre for Translational Biodiversity
(Himalopsyche japonica)
1.001Marine Science Research institute of Shandong Province
(Hexagrammos otakii)
1.001Minderoo OceanOmics Centre at University of the Western Australia
(Symphorus nematophorus)
1.001minjiang university
(Urechis unicinctus)
1.001Nanjing Normal University
(Dendrobium tosaense)
1.001National Human Genome Research Institute
(Macropodus opercularis)
1.001NODAI Genome Research Center, Tokyo University of Agriculture
(Aphanothece sacrum)
1.001None
(Aristolochia contorta)
1.001Northeast Normal University
(Nyctalus aviator)
1.001Northwest Institute of Plateau Biology, Chinese Academy of Sciences
(Elymus sibiricus)
1.001Rochester Institute of Technology
(Lonicera maackii)
1.001School of Ecology and Environment
(Coenobita brevimanus)
1.001Selaginella Consortium
(Selaginella moellendorffii)
1.001Shanghai Institutes for Biological Sciences
(Lethocerus indicus)
1.001Shenyang Agricultural University
(Monochoria korsakowii)
1.001South China Botanical Garden, Chinese Academy of Sciences
(Ottelia alismoides)
1.001South China National Botanical Garden
(Dalbergia candenatensis)
1.001Southwest University
(Balanoglossusmisakiensis)
1.002Squalomix
(Chiloscylliumpunctatum, Stegostoma fasciatum)
1.001The University of Sydney
(Magallana bilineata)
1.001the University of Tokyo
(Gasterosteus nipponicus)
1.001Trier University
(Ryuthela nishihirai sensu lato)
1.001Universidade Federal do Rio de Janeiro
(Limosa lapponica baueri)
1.001University College London
(Eptatretus atami)
1.001University of Alberta
(Sclerophora amabilis)
1.001University of Amsterdam
(Caulerpa lentillifera)
1.001University of Kentucky
(Entosphenus tridentatus)
1.001University of Southern California
(Lepidodactylus lugubris)
1.001Wildlife research center, Kyoto University
(Spilornis cheela perplexus)
0.873Northwestern Polytechnical University
(Cervus nippon, Magallana gigas, Okamejei kenojei)
0.832Academia Sinica
(Aix galericulata, Lingula nipponica)
0.832B10K project
(Glareola maldivarum, Tadorna ferruginea)
0.753Kunming University of Science and Technology
(Boletus edulis, Tricholoma bakamatsutake, Tricholoma matsutake)
0.752Yellow Sea Fisheries Research Institute
(Epinephelus lanceolatus, Epinephelus tukula)
0.752Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences
(Epinephelus lanceolatus, Magallana ariakensis)
0.672BGI-Shenzhen
(Calidris alpina, Magallana gigas)
0.672Korea University
(Tegillarca granosa, Tricholoma matsutake)
0.672Zhejiang University
(Pelodiscus sinensis, Trapa incisa)
0.532Northeast Forestry University
(Cervus nippon, Ciconia boyciana)
0.501Aalborg University
(Onygena corvina)
0.501BGI
(Coilia nasus)
0.501bgi
(Boleophthalmus pectinirostris)
0.501Canada's national platform for genome sequencing and analysis
(Clupea pallasii)
0.501Guangdong Key Laboratory of Animal Conservation and Resource Utilization
(Oncorhynchus masou masou)
0.501IBE(CSIC-UNIVERSITAT POMPEU FABRA)
(Macaca fuscata fuscata)
0.501Institute of Molecular and Cell Biology
(Lethenteron japonicum)
0.501Institute of Molecular and Cell Biology, A*star, Singapore
(Lethenteron japonicum)
0.501JIMEI UNIVERSITY
(Nibea albiflora)
0.501Liaoning Ocean and Fisheries Science Research Institute
(Coelomactra antiquata)
0.501Marine Fishery Institute of Zhejiang Province
(Nibea albiflora)
0.501Nanjing Agricultural University
(Coilia nasus)
0.501National Institutes of Natural Sciences
(Macaca fuscata fuscata)
0.501NMBU
(Onygena corvina)
0.501Novogene Bioinformatics Technology Corporation
(Sinonovacula constricta)
0.501Okinawa Institute of Science and Technology Graduate University (OIST)
(Lingula nipponica)
0.501Old Dominion University
(Hypoatherina temminckii)
0.501Phyloinformatics Unit, Division of Bio-Function Dynamics Imaging, Center for Life Science Technologies, RIKEN
(Chiloscylliumpunctatum)
0.501Royal Botanic Gardens Kew
(Cornicularia normoerica)
0.501Rural Development Administration
(Platycodon grandiflorus)
0.501Shanghai Ocean University
(Cheilinus undulatus)
0.501Shenzhen University
(Cheilinus undulatus)
0.501Theragen Etex Bio Institute
(Platycodon grandiflorus)
0.501University of Alaska Fairbanks
(Clupea pallasii)
0.501University of Glasgow
(Zootoca vivipara)
0.501University of Victoria
(Oncorhynchus masou masou)
0.501Yellow Sea fisheries Research Institution
(Verasper variegatus)
0.501Zhejiang Wanli University, College of Biological & Environmental Science
(Tegillarca granosa)
0.501Zhejing Wanli University
(Sinonovacula constricta)
0.422CSIRO Applied Genomics Initiative
(Cyprinus carpio, Misgurnus anguillicaudatus)
0.382Institute of Information Science
(Anguilla japonica, Epinephelus lanceolatus)
0.331BC Cancer Agency
(Enhydra lutris)
0.331Changnyeong county
(Nipponia nippon)
0.331College of Medicine and Forensics, Xi'an Jiaotong University
(Nipponia nippon)
0.331Division of Molecular Cell Biology, Department of Biomolecular Sciences, Faculty of Medicine, Saga University
(Lithospermum erythrorhizon)
0.331Fish10K
(Bostrychus sinensis)
0.331Huazhong Agriculture University
(Misgurnus anguillicaudatus)
0.331Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang
(Tricholoma bakamatsutake)
0.331NANJING UNIVERISTY
(Lithospermum erythrorhizon)
0.331Northeast Forestry university
(Inonotus obliquus)
0.331Purdue University
(Lithospermum erythrorhizon)
0.331Queen Mary University of London
(Caretta caretta)
0.331RIKEN
(Tricholoma bakamatsutake)
0.331School of Bioscience and Technology
(Inonotus obliquus)
0.331Senckenberg Gesellschaft fuer Naturforschung
(Umbilicaria deusta)
0.331Shaanxi normal university
(Nipponia nippon)
0.331UCLA
(Enhydra lutris)
0.331University of California, Santa Cruz
(Enhydra lutris)
0.331Zhejiang Uinveristy
(Grus japonensis)
0.251Anhui Provincial Key Laboratory of Microbial Pest Control
(Sanghuangporus sanghuang)
0.251Bielefeld University
(Boletus edulis)
0.251Center for Ecological and Environmental Sciences
(Tachypleus tridentatus)
0.251Fudan University
(Tachypleus tridentatus)
0.251INRAE - GeT-PlaGe
(Coturnix japonica)
0.251Institute of Deep-sea Science and Engineering
(Dugong dugon)
0.251Institute of Microbiology, Chinese Academy of Sciences
(Sanghuangporus sanghuang)
0.251Max-Planck Institute for Evolutionary Anthropology
(Dugong dugon)
0.251McDonnell Genome Institute - Washington University School of Medicine
(Coturnix japonica)
0.251National Science and Technology Development Agency
(Avicennia marina)
0.251NBRP Chickens & Quails
(Coturnix japonica)
0.251New York University Abu Dhabi
(Avicennia marina)
0.251Ocean College, Qinzhou University
(Tachypleus tridentatus)
0.251Seoul National University
(Sanghuangporus sanghuang)
0.251SRM University
(Avicennia marina)
0.251Tokyo University of Agriculture
(Coturnix japonica)
0.251University of Utah
(Boletus edulis)
0.251Yunnan Academy of Forestry and Grassland
(Sanghuangporus sanghuang)
0.222ZF-screens B.V.
(Anguilla japonica, Cyprinus carpio)
0.201Azabu University
(Cervus nippon)
0.201Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo
(Oryzias latipes)
0.201EMBL-EBI
(Oryzias latipes)
0.201Environmental Genomics Office, Biodiversity Division, National Institute for Environmental Studies
(Oryzias latipes)
0.201Jiangxi Agricultural University
(Cervus nippon)
0.201Medaka genome sequencing project
(Oryzias latipes)
0.201northwestern polytechnology university
(Cervus nippon)
0.171Labolatoly of food microbiology and engineering, Applied Life Chemistry, Faculty of Agriculture , Kindai University
(Tricholoma matsutake)
0.171National Institue of Forest Science
(Tricholoma matsutake)
0.171P. sinensis genome project consortium
(Pelodiscus sinensis)
0.171Pearl River Fisheries Research Institute
(Pelodiscus sinensis)
0.171The French Research Institute for Exploitation of the Sea
(Magallana gigas)
0.171THE ROSLIN INSTITUTE
(Magallana gigas)
0.171Zhejiang Institute of Freshwater Fisheries
(Pelodiscus sinensis)
0.141Anser cygnoides Genome consortium
(Anser cygnoides)
0.141Heilongjiang Bayi Agricultural University
(Anser cygnoides)
0.141Jiangsu Agri-animal Husbandry Vocational College
(Anser cygnoides)
0.141Jilin University
(Anser cygnoides)
0.141Poultry Science Institute
(Anser cygnoides)
0.141Qingdao Agricultural University
(Anser cygnoides)
0.141South China Agricultural University
(Anser cygnoides)
0.121BGI-SZ ocean institute
(Anguilla japonica)
0.121Hong Kong Baptist University
(Anguilla japonica)
0.121INSTITUTE OF INFORMATION SCIENCE, Academia Sinica
(Anguilla japonica)
0.121National Research Institute of Fisheries Science
(Anguilla japonica)
0.121Tohoku National Fisheries Research Institute
(Anguilla japonica)
0.121University of Chinese Academy of Sciences
(Anguilla japonica)
0.091BGI-SZ
(Cyprinus carpio)
0.091Biozeron Shenzhen Inc.
(Cyprinus carpio)
0.091CHINESE ACADEMY OF FISHERY SCIENCE
(Cyprinus carpio)
0.091Chinese Academy of Fishery Sciences
(Cyprinus carpio)
0.091Integrative SciencCenter of Germplasm Creation in Western China (Chongqing) Science City
(Cyprinus carpio)
0.091Nihon BioData Corporation.
(Cyprinus carpio)
0.091The Max Planck Institute of Molecular Cell Biology and Genetics
(Cyprinus carpio)
0.091WAGENINGEN UR
(Cyprinus carpio)