Genome sequence data availability
for the Japanese Red Lists
Updated on 2024-10-01
This page shows only entries from the "Other marine invertebrates" Red List section. This table is also available in TSV format.
This page shows only entries from the "Other marine invertebrates" Red List section. This table is also available in TSV format.
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Lingula adamsi オオシャミセンガイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/19 (5.3%) | 1/41 (2.4%) | — |
| EN 絶滅危惧IB類 | Hediste japonica アリアケカワゴカイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/16 (0.0%) | 3/644 (0.5%) | — |
| EN 絶滅危惧IB類 | Chaetopterus cautus ツバサゴカイ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/53 (0.0%) | 0/195 (0.0%) | — |
| VU 絶滅危惧II類 | Branchiostoma japonicum ヒガシナメクジウオ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 16 | 17 | 5/20 (25.0%) | 6/26 (23.1%) | — |
| NT 準絶滅危惧 | Coralliumjaponicum アカサンゴ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 3 | 1/28 (3.6%) | 2/242 (0.8%) | — |
| NT 準絶滅危惧 | Pleurocoralliumelatius モモイロサンゴ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/25 (0.0%) | 2/242 (0.8%) | — |
| NT 準絶滅危惧 | Pleurocoralliumkonojoi シロサンゴ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/25 (0.0%) | 2/242 (0.8%) | — |
| NT 準絶滅危惧 | Nectoneanthes uchiwa ウチワゴカイ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/23 (0.0%) | 3/644 (0.5%) | — |
| NT 準絶滅危惧 | Tylorrhynchus osawai イトメ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/2 (0.0%) | 3/644 (0.5%) | — |
| NT 準絶滅危惧 | Halla okudai アカムシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/26 (0.0%) | — |
| NT 準絶滅危惧 | Chaetopterus kagosimensis 和名なし | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/53 (0.0%) | 0/195 (0.0%) | — |
| NT 準絶滅危惧 | Mesochaetopterus japonicus ムギワラムシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/30 (0.0%) | 0/195 (0.0%) | — |
| NT 準絶滅危惧 | Siphonosoma cumanense スジホシムシモドキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/15 (0.0%) | 1/58 (1.7%) | — |
| NT 準絶滅危惧 | Sipunculus nudus スジホシムシ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Chromosome, Reference | 1.42 Gbp 73.0x | 306 28.5 Mbp | 1 | 1 | 1 | 1/36 (2.8%) | 1/58 (1.7%) | 2022-12-14 |
| NT 準絶滅危惧 | Anelassorhyncus sabinus サビネミドリユムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| NT 準絶滅危惧 | Arhynchite hayaoi セトウチドチクチユムシ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/4 (0.0%) | 0/39 (0.0%) | — |
| NT 準絶滅危惧 | Ikeda taenioides サナダユムシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/6 (0.0%) | 0/13 (0.0%) | — |
| NT 準絶滅危惧 | Ikedosoma elegans ユメユムシ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/39 (0.0%) | — |
| NT 準絶滅危惧 | Ikedosoma gogoshimense ゴゴシマユムシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/39 (0.0%) | — |
| NT 準絶滅危惧 | Urechis unicinctus ユムシ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Chromosome, Reference | 1.19 Gbp 370.0x | 7,414 547 kbp | 1 | 1 | 1 | 1/6 (16.7%) | 1/6 (16.7%) | 2023-12-20 |
| NT 準絶滅危惧 | Balanoglossus carnosus ワダツミギボシムシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/8 (0.0%) | 1/21 (4.8%) | — |
| NT 準絶滅危惧 | Balanoglossusmisakiensis ミサキギボシムシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/8 (0.0%) | 1/21 (4.8%) | — |
| NT 準絶滅危惧 | Asymmetron sp. 1 オナガナメクジウオ種1 | — | — | — | — | — | No | — | — | — | 0 | 1 | 17 | 1/4 (25.0%) | 6/26 (23.1%) | — |
| NT 準絶滅危惧 | Asymmetron sp. 2 オナガナメクジウオ種2 | — | — | — | — | — | No | — | — | — | 0 | 1 | 17 | 1/4 (25.0%) | 6/26 (23.1%) | — |
| DD 情報不足 | Lingula nipponica ムツシャミセンガイ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 406 Mbp 226.0x | 13,877 56.1 kbp | 1 | 1 | 1 | 1/19 (5.3%) | 1/41 (2.4%) | 2018-01-26 |
| DD 情報不足 | Lingula sp. 1 ミドリシャミセンガイ種1（奄美大島笠利湾など） | — | — | — | — | — | No | — | — | — | 0 | 1 | 1 | 1/19 (5.3%) | 1/41 (2.4%) | — |
| DD 情報不足 | Lingula sp. 2 ミドリシャミセンガイ種2（有明海など） | — | — | — | — | — | No | — | — | — | 0 | 1 | 1 | 1/19 (5.3%) | 1/41 (2.4%) | — |
| DD 情報不足 | Lingula sp. 3 ミドリシャミセンガイ種3（下田沖など） | — | — | — | — | — | No | — | — | — | 0 | 1 | 1 | 1/19 (5.3%) | 1/41 (2.4%) | — |
| DD 情報不足 | Hesperonoe hwanghaiensis アナジャコウロコムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 10 | 0/2 (0.0%) | 6/619 (1.0%) | — |
| DD 情報不足 | Natsushima graciliceps サツマフタカギヤドリ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/6 (0.0%) | — |
| DD 情報不足 | Marphysa tamurai ビクニイワムシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/81 (0.0%) | 0/226 (0.0%) | — |
| DD 情報不足 | Siphonosoma funafuti アマミスジホシムシモドキ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/15 (0.0%) | 1/58 (1.7%) | — |
| DD 情報不足 | Anelassorhyncusmucosus ミドリユムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Arhynchite arhynchite ドチクチユムシ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/4 (0.0%) | 0/39 (0.0%) | — |
| DD 情報不足 | Balanoglossus simodensis シモダギボシムシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/8 (0.0%) | 1/21 (4.8%) | — |
| DD 情報不足 | Saccoglossus borealis キタギボシムシ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 3 | 2/10 (20.0%) | 2/33 (6.1%) | — |
| DD 情報不足 | Epigonichthysmaldivensis カタナメクジウオ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 17 | 0/2 (0.0%) | 6/26 (23.1%) | — |
| LP 絶滅のおそれの ある地域個体群 | Lamellibrachia satsuma 鹿児島湾のサツマハオリムシ | — | ✓ | ✓ | ✓ | ✓ | Yes (2) | Scaffold, Reference | 736 Mbp 52.0x | 378 6.63 Mbp | 2 | 5 | 17 | 3/43 (7.0%) | 9/228 (3.9%) | 2022-03-04 |