Genome sequence data availability
for the Japanese Red Lists
Updated on 2024-10-01
This page shows only entries from the "Lichen" Red List section. This table is also available in TSV format.
This page shows only entries from the "Lichen" Red List section. This table is also available in TSV format.
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| EX 絶滅 | Erioderma tomentosum Hue ヌマジリゴケ | — | — | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 4 | 0/4 (0.0%) | 4/144 (2.8%) | — |
| EX 絶滅 | Heterodermia angustiloba (Müll.Arg.) D.D.Awasthi ホソゲジゲジゴケ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 8 | 22 | 7/45 (15.6%) | 20/340 (5.9%) | — |
| EX 絶滅 | Heterodermia leucomelos (L.) Poelt イトゲジゲジゴケモドキ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 8 | 22 | 7/45 (15.6%) | 20/340 (5.9%) | — |
| EX 絶滅 | Siphula ceratites (Wahlenb.) Fr. シロツノゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/15 (0.0%) | 3/41 (7.3%) | — |
| CR 絶滅危惧IA類 | Flavopunctelia flaventior (Stirt.) Hale ハクテンヒメキウメノキゴケ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 33.4 Mbp 23.0x | 2,554 18.5 kbp | 1 | 1 | 89 | 1/6 (16.7%) | 74/1665 (4.4%) | 2024-09-21 |
| CR 絶滅危惧IA類 | Ramalina yokotae Kashiw. & K.H.Moon ヨコタカラタチゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 8 | 17 | 8/168 (4.8%) | 17/618 (2.8%) | — |
| CR+EN 絶滅危惧I類 | Acroscyphus sphaerophoroides Lév. カニメゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 9 | 0/1 (0.0%) | 8/231 (3.5%) | — |
| CR+EN 絶滅危惧I類 | Calicium muriformis Tibell イシガキピンゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 9 | 0/37 (0.0%) | 8/231 (3.5%) | — |
| CR+EN 絶滅危惧I類 | Carbacanthographis iriomotensis (M.Nakan.) M.Nakan. & Kashiw. イリオモテシロコナモジゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/4 (0.0%) | 11/840 (1.3%) | — |
| CR+EN 絶滅危惧I類 | Cetraria aculeata (Schreb.) Fr. タチクリイロトゲキノリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 89 | 0/22 (0.0%) | 74/1665 (4.4%) | — |
| CR+EN 絶滅危惧I類 | Cetraria odontella (Ach.) Ach. トゲエイランタイモドキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 89 | 0/22 (0.0%) | 74/1665 (4.4%) | — |
| CR+EN 絶滅危惧I類 | Cetrelia alaskana (W.L.Culb. & C.F.Culb.) W.L.Culb. & C.F.Culb. タカネトコブシゴケ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 2 | 89 | 2/12 (16.7%) | 74/1665 (4.4%) | — |
| CR+EN 絶滅危惧I類 | Cladonia acuminata (Ach.) Norrl. ミゾハナゴケモドキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 33 | 34 | 24/359 (6.7%) | 25/397 (6.3%) | — |
| CR+EN 絶滅危惧I類 | Cladonia koyaënsis Asahina コウヤハナゴケ | — | — | — | ✓ | — | No | — | — | — | 0 | 33 | 34 | 24/359 (6.7%) | 25/397 (6.3%) | — |
| CR+EN 絶滅危惧I類 | Cornicularia normoerica (Gunnerus) Du Rietz ミヤマヒジキゴケ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 25.7 Mbp 116.0x | 453 78.8 kbp | 1 | 1 | 89 | 1/1 (100.0%) | 74/1665 (4.4%) | 2024-09-21 |
| CR+EN 絶滅危惧I類 | Dermatocarpon tuzibei M.Satô ミヤマウロコゴケ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 2 | 6 | 2/31 (6.5%) | 4/509 (0.8%) | — |
| CR+EN 絶滅危惧I類 | Dermatocarpon vellereum Zschacke クロウラカワイワタケ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 2 | 6 | 2/31 (6.5%) | 4/509 (0.8%) | — |
| CR+EN 絶滅危惧I類 | Erioderma sorediatum D.J.Galloway & P.M.Jørg. アキハゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/4 (0.0%) | 4/144 (2.8%) | — |
| CR+EN 絶滅危惧I類 | Fissurina flavicans (Kashiw.) M.Nakan. & Kashiw. ウチキモジゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 13 | 1/55 (1.8%) | 11/840 (1.3%) | — |
| CR+EN 絶滅危惧I類 | Fissurina fujisanensis (Kashiw. & M.Nakan.) M.Nakan. & Kashiw. フジノモジゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 13 | 1/55 (1.8%) | 11/840 (1.3%) | — |
| CR+EN 絶滅危惧I類 | Flavocetraria nivalis (L.) Kärnefelt & A.Thell コガネエイランタイ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 1 | 89 | 1/4 (25.0%) | 74/1665 (4.4%) | — |
| CR+EN 絶滅危惧I類 | Glossodium japonicum Zahlbr. ヘラゴケ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 1 | 3 | 1/6 (16.7%) | 3/41 (7.3%) | — |
| CR+EN 絶滅危惧I類 | Gymnoderma coccocarpum Nyl. オオツブミゴケ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 34 | 0/1 (0.0%) | 25/397 (6.3%) | — |
| CR+EN 絶滅危惧I類 | Gymnoderma insulare Yoshim. & Sharp ツブミゴケ | EN | — | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 34 | 0/1 (0.0%) | 25/397 (6.3%) | — |
| CR+EN 絶滅危惧I類 | Hypotrachyna sinuosa (Sm.) Hale ニュウガサウメノキゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 4 | 89 | 4/89 (4.5%) | 74/1665 (4.4%) | — |
| CR+EN 絶滅危惧I類 | Lecidea tessellata var. caesia (Anzi) Arnold キタダケヘリトリゴケ | — | — | ✓ | ✓ | — | No | — | — | — | 1 | 2 | 7 | 2/111 (1.8%) | 7/278 (2.5%) | — |
| CR+EN 絶滅危惧I類 | Lethariella togashii (Asahina) Krog ナヨナヨサガリゴケ | VU | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 89 | 0/9 (0.0%) | 74/1665 (4.4%) | — |
| CR+EN 絶滅危惧I類 | Menegazzia asahinae (Yasuda) R.Sant. フクレセンシゴケ | — | — | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 89 | 0/18 (0.0%) | 74/1665 (4.4%) | — |
| CR+EN 絶滅危惧I類 | Myelochroa amagiensis (Asahina) Elix & Hale アマギウメノキゴケ | — | — | — | — | — | No | — | — | — | 0 | 0 | 89 | 0/16 (0.0%) | 74/1665 (4.4%) | — |
| CR+EN 絶滅危惧I類 | Paulia japonica Asahina ヤブレガサゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/4 (0.0%) | 5/57 (8.8%) | — |
| CR+EN 絶滅危惧I類 | Peltigera lepidophora (Vain.) Bitter ハナビラツメゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 7 | 8 | 7/240 (2.9%) | 8/247 (3.2%) | — |
| CR+EN 絶滅危惧I類 | Pertusaria boninensis Shibuichi オガサワラトリハダゴケ | — | — | — | — | — | No | — | — | — | 0 | 6 | 13 | 6/93 (6.5%) | 12/142 (8.5%) | — |
| CR+EN 絶滅危惧I類 | Pyrgillus javanicus Nyl. エントツゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/1 (0.0%) | 3/81 (3.7%) | — |
| CR+EN 絶滅危惧I類 | Ramalodium japonicum (Asahina) Henssen ヒメキノリ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 5 | 0/2 (0.0%) | 4/353 (1.1%) | — |
| CR+EN 絶滅危惧I類 | Relicina echinocarpa (Kurok.) Hale トゲナシフトネゴケ | — | — | — | — | — | No | — | — | — | 0 | 0 | 89 | 0/11 (0.0%) | 74/1665 (4.4%) | — |
| CR+EN 絶滅危惧I類 | Relicina segregata Elix トゲナシフトネゴケモドキ | — | — | — | — | — | No | — | — | — | 0 | 0 | 89 | 0/11 (0.0%) | 74/1665 (4.4%) | — |
| CR+EN 絶滅危惧I類 | Siphula decumbens Nyl. コバノシロツノゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/15 (0.0%) | 3/41 (7.3%) | — |
| CR+EN 絶滅危惧I類 | Solorina platycarpa Hue ヒラミヤイトゴケ | — | ✓ | — | — | — | No | — | — | — | 0 | 1 | 8 | 1/6 (16.7%) | 8/247 (3.2%) | — |
| CR+EN 絶滅危惧I類 | Solorina saccata (L.) Ach. クボミヤイトゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 8 | 1/6 (16.7%) | 8/247 (3.2%) | — |
| CR+EN 絶滅危惧I類 | Solorina spongiosa (Ach.) Anzi エダウチヤイトゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 8 | 1/6 (16.7%) | 8/247 (3.2%) | — |
| CR+EN 絶滅危惧I類 | Stereocaulon curtatoides Asahina ニセミヤマキゴケ | — | — | — | ✓ | — | No | — | — | — | 0 | 2 | 5 | 2/72 (2.8%) | 5/172 (2.9%) | — |
| CR+EN 絶滅危惧I類 | Stereocaulon wrightii Tuck. ヒロハキゴケモドキ | — | — | — | ✓ | — | No | — | — | — | 0 | 2 | 5 | 2/72 (2.8%) | 5/172 (2.9%) | — |
| CR+EN 絶滅危惧I類 | Sticta arctica Degel. タカネヨロイゴケ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 2 | 6 | 2/320 (0.6%) | 6/587 (1.0%) | — |
| CR+EN 絶滅危惧I類 | Thyrea latissima Asahina オオバキセガワノリ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 5 | 0/4 (0.0%) | 5/57 (8.8%) | — |
| CR+EN 絶滅危惧I類 | Toninia tristis ssp. fujikawae (M.Satô) Timdal フジカワゴケ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 17 | 0/20 (0.0%) | 17/618 (2.8%) | — |
| CR+EN 絶滅危惧I類 | Umbilicaria muehlenbergii (Ach.) Tuck. オオウラヒダイワタケ | — | ✓ | — | ✓ | — | Yes (1) | Scaffold, Reference | 34.8 Mbp 663.0x | 297 211 kbp | 1 | 12 | 62 | 11/88 (12.5%) | 13/104 (12.5%) | 2014-04-02 |
| CR+EN 絶滅危惧I類 | Usnocetraria oakesiana (Tuck.) M.J. Lai & J.C. Wei オアケシゴケ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 30.3 Mbp 8.0x | 4,382 8.88 kbp | 1 | 1 | 89 | 1/1 (100.0%) | 74/1665 (4.4%) | 2024-09-21 |
| VU 絶滅危惧II類 | Brigantiaea nipponica (M.Satô) Hafellner オオサビイボゴケ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 1 | 1 | 1/11 (9.1%) | 1/12 (8.3%) | — |
| VU 絶滅危惧II類 | Flavocetraria cucullata (Bellardi) Kärnefelt & A.Thell ウスキエイランタイ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 38.0 Mbp 89.0x | 420 147 kbp | 1 | 1 | 89 | 1/4 (25.0%) | 74/1665 (4.4%) | 2024-09-21 |
| VU 絶滅危惧II類 | Flavopunctelia soredica (Nyl.) Hale ヒメキウメノキゴケ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 1 | 89 | 1/6 (16.7%) | 74/1665 (4.4%) | — |
| VU 絶滅危惧II類 | Leioderma sorediatum D.J.Galloway & P.M.Jørg. コフキニセハナビラゴケ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/2 (0.0%) | 4/144 (2.8%) | — |
| VU 絶滅危惧II類 | Leiorreuma yakushimense (M.Nakan.) M.Nakan. & Kashiw. ヤクシマモジゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/3 (0.0%) | 11/840 (1.3%) | — |
| VU 絶滅危惧II類 | Leptogium palmatum (Huds.) Mont テガタアオキノリ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 4 | 5 | 3/266 (1.1%) | 4/353 (1.1%) | — |
| VU 絶滅危惧II類 | Lobaria kazawaënsis (Asahina) Yoshim. トゲカブトゴケ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 2 | 6 | 2/77 (2.6%) | 6/587 (1.0%) | — |
| VU 絶滅危惧II類 | Menegazzia squamatica K.H.Moon et al. ウスキクダチイ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 89 | 0/18 (0.0%) | 74/1665 (4.4%) | — |
| VU 絶滅危惧II類 | Oropogon orientalis (Gyeln.) Essl. ヨシノミヤマクグラ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 0 | 89 | 0/40 (0.0%) | 74/1665 (4.4%) | — |
| VU 絶滅危惧II類 | Parmelia erumpens Kurok. アワフキカラクサゴケ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 89 | 2/52 (3.8%) | 74/1665 (4.4%) | — |
| VU 絶滅危惧II類 | Parmotrema eciliatum (Nyl.) Hale トゲナシウメノキゴケ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 14 | 89 | 14/126 (11.1%) | 74/1665 (4.4%) | — |
| VU 絶滅危惧II類 | Peltigera nigripunctata Bitter コヒラミツメゴケ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 7 | 8 | 7/240 (2.9%) | 8/247 (3.2%) | — |
| VU 絶滅危惧II類 | Peltigera venosa (L.) Hoffm. ヒメツメゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 7 | 8 | 7/240 (2.9%) | 8/247 (3.2%) | — |
| VU 絶滅危惧II類 | Platygramme platyloma (Müll.Arg.) M.Nakan. & Kashiw. フチヒロモジゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/10 (0.0%) | 11/840 (1.3%) | — |
| VU 絶滅危惧II類 | Platygramme pseudomontagnei (M.Nakan.) M.Nakan. & Kashiw. ニセユモジゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/10 (0.0%) | 11/840 (1.3%) | — |
| VU 絶滅危惧II類 | Platygramme pudica (Mont. & Bosch) M.Nakan. & Kashiw. ウスカワフチヒロモジゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/10 (0.0%) | 11/840 (1.3%) | — |
| VU 絶滅危惧II類 | Sticta limbata (Sm.) Ach. コフキセンスゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 6 | 2/320 (0.6%) | 6/587 (1.0%) | — |
| VU 絶滅危惧II類 | Umbilicaria deusta (L.) Baumg. トゲイワタケ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 40.9 Mbp 353.0x | 48 1.67 Mbp | 1 | 12 | 62 | 11/88 (12.5%) | 13/104 (12.5%) | 2022-04-29 |
| VU 絶滅危惧II類 | Usnea dasopoga (Ach.) Nyl. ナガヒゲサルオガセ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 13 | 89 | 12/234 (5.1%) | 74/1665 (4.4%) | — |
| VU 絶滅危惧II類 | Usnocetraria kurokawae (Shibuichi & Yoshida) M.J. Lai & J.C. Wei クロカワアワビゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 89 | 1/1 (100.0%) | 74/1665 (4.4%) | — |
| NT 準絶滅危惧 | Arthonia cyanea Müll.Arg. アマミホシゴケ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 4 | 3/66 (4.5%) | 4/176 (2.3%) | — |
| NT 準絶滅危惧 | Arthonia fuscocyanea U.Becker & Lücking チャイロホシゴケ | — | — | — | — | — | No | — | — | — | 0 | 3 | 4 | 3/66 (4.5%) | 4/176 (2.3%) | — |
| NT 準絶滅危惧 | Bacidia micrommata (Kremp.) R.Sant. アマミイボゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 17 | 2/56 (3.6%) | 17/618 (2.8%) | — |
| NT 準絶滅危惧 | Byssoloma annuum (Vain.) G.Thor et al. ウスチャワタヘリゴケ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 2 | 2/20 (10.0%) | 2/66 (3.0%) | — |
| NT 準絶滅危惧 | Byssoloma discordans var. flavescens G.Thor et al. リュウキュウワタヘリゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 2 | 2/20 (10.0%) | 2/66 (3.0%) | — |
| NT 準絶滅危惧 | Catolechia wahlenbergii (Ach.) Flot. キイロスミイボゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/1 (0.0%) | 2/87 (2.3%) | — |
| NT 準絶滅危惧 | Cetrariella delisei (Schaer.) Kärnefelt & A.Thell トゲエイランタイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 89 | 0/6 (0.0%) | 74/1665 (4.4%) | — |
| NT 準絶滅危惧 | Chiodecton congestulum Nyl. ヒョウモンメダイゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/9 (0.0%) | 0/177 (0.0%) | — |
| NT 準絶滅危惧 | Cladonia brevis (Sandst.) Sandst. ヒメミゾハナゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 33 | 34 | 24/359 (6.7%) | 25/397 (6.3%) | — |
| NT 準絶滅危惧 | Collema callopismum A.Massal. ガリンイワノリ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/18 (0.0%) | 4/353 (1.1%) | — |
| NT 準絶滅危惧 | Collema latzelii Zahlbr. ウスバイシバイイワノリ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 5 | 1/25 (4.0%) | 4/353 (1.1%) | — |
| NT 準絶滅危惧 | Dichosporidium boschianum (Mont.) G.Thor フェルトゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/177 (0.0%) | — |
| NT 準絶滅危惧 | Dichosporidium sorediatum G.Thor マダラフェルトゴケ | — | — | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/177 (0.0%) | — |
| NT 準絶滅危惧 | Echinoplaca epiphylla Fée ヒメヒゲチイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/20 (0.0%) | 11/840 (1.3%) | — |
| NT 準絶滅危惧 | Enterographa multiseptata R.Sant. ヨウジョウクチナワゴケ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/16 (0.0%) | 0/177 (0.0%) | — |
| NT 準絶滅危惧 | Fellhanera subfuscatula Lücking ビスケットゴケモドキ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 2 | 0/12 (0.0%) | 2/66 (3.0%) | — |
| NT 準絶滅危惧 | Fuscidea intercincta (Nyl.) Poelt アバタフスキデア | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/19 (0.0%) | 0/23 (0.0%) | — |
| NT 準絶滅危惧 | Hypotrachyna crenata (Kurok.) Hale クイシウメノキゴケ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 0 | 89 | 0/16 (0.0%) | 74/1665 (4.4%) | — |
| NT 準絶滅危惧 | Letrouitia bifera (Nyl.) Hafellner キンカンゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 3 | 3 | 2/18 (11.1%) | 2/18 (11.1%) | — |
| NT 準絶滅危惧 | Loflammia epiphylla (Fée) Lücking & Vĕzda ベニハシゴケ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| NT 準絶滅危惧 | Menegazzia caviisidia Bjerke & P.James ツブクダチイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 89 | 0/18 (0.0%) | 74/1665 (4.4%) | — |
| NT 準絶滅危惧 | Ophioparma handelii (Zahlbr.) Printzen & Rambold ザクロゴケモドキ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/5 (0.0%) | 1/10 (10.0%) | — |
| NT 準絶滅危惧 | Parmeliella mariana (Fr.) P.M.Jørg. & D.J.Galloway シマハナビラゴケ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/4 (0.0%) | 4/353 (1.1%) | — |
| NT 準絶滅危惧 | Parmotrema parahypotropum (W.L.Culb.) Hale タチナミガタウメノキゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 14 | 89 | 14/126 (11.1%) | 74/1665 (4.4%) | — |
| NT 準絶滅危惧 | Parmotrema rampoddense (Nyl.) Hale コナマツゲゴケ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 32.6 Mbp 19.0x | 2,509 17.5 kbp | 1 | 2 | 13 | 2/28 (7.1%) | 11/840 (1.3%) | 2024-09-21 |
| NT 準絶滅危惧 | Phaeographis laevigata (M.Nakan.) M.Nakan. & Kashiw. スギノウエノモジゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/44 (0.0%) | 11/840 (1.3%) | — |
| NT 準絶滅危惧 | Physconia hokkaidensis Kashiw. エゾハクフンゴケ | — | — | — | — | — | No | — | — | — | 0 | 0 | 22 | 0/25 (0.0%) | 20/340 (5.9%) | — |
| NT 準絶滅危惧 | Platismatia erosa W.L.Culb. & C.F.Culb. トゲタイワントコブシゴケ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 4 | 89 | 2/9 (22.2%) | 74/1665 (4.4%) | — |
| NT 準絶滅危惧 | Porina subrubrosphaera Kurok. クロカワホルトノキゴケ | — | — | — | — | — | No | — | — | — | 0 | 1 | 1 | 1/93 (1.1%) | 1/99 (1.0%) | — |
| NT 準絶滅危惧 | Porina trichothelioides R.Sant. イガグリマルゴケ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/93 (1.1%) | 1/99 (1.0%) | — |
| NT 準絶滅危惧 | Pseudocyphellaria argyracea (Del.) Vain. ハクテンヨロイゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 6 | 1/90 (1.1%) | 6/587 (1.0%) | — |
| NT 準絶滅危惧 | Psora rubiformis (Ach.) Hook. ハナビラチイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/30 (0.0%) | 2/50 (4.0%) | — |
| NT 準絶滅危惧 | Sclerophora nivea (J.F. Gmel.) Tibell コガネサビクギゴケ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/6 (16.7%) | 2/36 (5.6%) | — |
| NT 準絶滅危惧 | Semigyalecta paradoxa Vain. ニセサラゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| NT 準絶滅危惧 | Solorina crocea (L.) Ach. アカウラヤイトゴケ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 93.7 Mbp 54.0x | 3,612 45.9 kbp | 1 | 1 | 8 | 1/6 (16.7%) | 8/247 (3.2%) | 2024-09-21 |
| NT 準絶滅危惧 | Strigula bella G.Thor et al. オニマンジュウゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/29 (0.0%) | 0/54 (0.0%) | — |
| NT 準絶滅危惧 | Strigula concreta (Fée) R.Sant. ヒラマンジュウゴケ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/29 (0.0%) | 0/54 (0.0%) | — |
| NT 準絶滅危惧 | Usnea koyana Asahina コウヤサルオガセ | — | — | — | — | — | No | — | — | — | 0 | 13 | 89 | 12/234 (5.1%) | 74/1665 (4.4%) | — |
| NT 準絶滅危惧 | Usnea longissima Ach. ナガサルオガセ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 89 | 0/3 (0.0%) | 74/1665 (4.4%) | — |
| NT 準絶滅危惧 | Usnea nipparensis Asahina ニッパラサルオガセ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 13 | 89 | 12/234 (5.1%) | 74/1665 (4.4%) | — |
| NT 準絶滅危惧 | Usnea yakushimensis Asahina ヤクシマサルオガセ | — | — | — | — | — | No | — | — | — | 0 | 13 | 89 | 12/234 (5.1%) | 74/1665 (4.4%) | — |
| DD 情報不足 | Aderkomyces albostrigosus (R.Sant.) Lücking et al. ヨウジョウシロヒゲ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/8 (0.0%) | 11/840 (1.3%) | — |
| DD 情報不足 | Badimia pallidula (Kremp.) Vĕzda ヨツハシゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/5 (0.0%) | 0/21 (0.0%) | — |
| DD 情報不足 | Baeomyces sanguineus Asahina チゾメセンニンゴケ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/6 (0.0%) | 0/14 (0.0%) | — |
| DD 情報不足 | Bapalmuia palmularis (Müll.Arg.) Sérus. ナガミイボゴケ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/1 (0.0%) | 2/66 (3.0%) | — |
| DD 情報不足 | Barubria fuscorubra (Vĕzda) Vĕzda ツエミハシゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Carbacanthographis marcescens (Fée) Staiger & Kalb ウチグロシロコナモジゴケ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/4 (0.0%) | 11/840 (1.3%) | — |
| DD 情報不足 | Chroodiscus mirificus (Kremp.) R.Sant. コゲボシゴケモドキ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/9 (0.0%) | 11/840 (1.3%) | — |
| DD 情報不足 | Cladonia inobeana Asahina イノベハナゴケ | — | — | — | — | — | No | — | — | — | 0 | 33 | 34 | 24/359 (6.7%) | 25/397 (6.3%) | — |
| DD 情報不足 | Collema coccophyllum Nyl. コツブイワノリ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 5 | 1/25 (4.0%) | 4/353 (1.1%) | — |
| DD 情報不足 | Collema nipponicum Degel. アツバイワノリ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 5 | 1/25 (4.0%) | 4/353 (1.1%) | — |
| DD 情報不足 | Collema peregrinum Degel. ツノイワノリ | — | — | — | ✓ | — | No | — | — | — | 0 | 1 | 5 | 1/25 (4.0%) | 4/353 (1.1%) | — |
| DD 情報不足 | Collema shiroumanum var. kiusianum (Asahina) Degel. サツマ(ツクシ)イワノリ | — | — | — | — | — | No | — | — | — | 0 | 1 | 5 | 1/25 (4.0%) | 4/353 (1.1%) | — |
| DD 情報不足 | Collema substipitatum Zahlbr. シオバラノリ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 5 | 1/25 (4.0%) | 4/353 (1.1%) | — |
| DD 情報不足 | Gyalectidium radiatum Lücking et al. ツブクボミサラゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/10 (0.0%) | 11/840 (1.3%) | — |
| DD 情報不足 | Hemithecium endofuscum (M.Nakan.) M.Nakan. & Kashiw. ナカチャシロモジゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/4 (0.0%) | 11/840 (1.3%) | — |
| DD 情報不足 | Heterodermia pacifica (Kurok.) Kurok. ムニンゲジゲジゴケ | — | — | — | ✓ | — | No | — | — | — | 0 | 8 | 22 | 7/45 (15.6%) | 20/340 (5.9%) | — |
| DD 情報不足 | Hyperphyscia adglutinata (Flörke) H.Mayrhofer & Poelt コナムカデゴケモドキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 22 | 0/3 (0.0%) | 20/340 (5.9%) | — |
| DD 情報不足 | Hypotrachyna imbricatula (Zahlbr.) Hale ヒュウガウメノキゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 4 | 89 | 4/89 (4.5%) | 74/1665 (4.4%) | — |
| DD 情報不足 | Lobothallia alphoplaca (Wahlenb.) Hafellner ウロコクボミゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/26 (0.0%) | 1/227 (0.4%) | — |
| DD 情報不足 | Loxospora glaucomiza (Nyl.) Kalb & Straiger コフキザクロゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 2 | 2/4 (50.0%) | 2/8 (25.0%) | — |
| DD 情報不足 | Malcolmiella aurigera (Fée) Aptroot ミナミノヘリトリゴケモドキ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/13 (0.0%) | 2/66 (3.0%) | — |
| DD 情報不足 | Maronea constans (Nyl.) Hepp アオチャゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/23 (0.0%) | — |
| DD 情報不足 | Melanelixia fuliginosa (Duby) O.Blanco et al. トゲオリーブゴケモドキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 89 | 0/24 (0.0%) | 74/1665 (4.4%) | — |
| DD 情報不足 | Microtheliopsis uleana Müll.Arg. シズクゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| DD 情報不足 | Montanelia sorediata (Ach.) Divakar et al. コナタカネゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 89 | 0/9 (0.0%) | 74/1665 (4.4%) | — |
| DD 情報不足 | Orphniospora moriopsis (A.Massal.) D.Hawksw. チャイロヘリトリゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/23 (0.0%) | — |
| DD 情報不足 | Parmelia sulcata Taylor コフキカラクサゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 89 | 2/52 (3.8%) | 74/1665 (4.4%) | — |
| DD 情報不足 | Porina chrysophora (Stirt.) R.Sant. キイロホルトノキゴケ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/93 (1.1%) | 1/99 (1.0%) | — |
| DD 情報不足 | Porina virescens (Kremp.) Müll.Arg. ミドリホルトノキゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/93 (1.1%) | 1/99 (1.0%) | — |
| DD 情報不足 | Psoroma boninense Kurok. ムニンゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/17 (0.0%) | 4/144 (2.8%) | — |
| DD 情報不足 | Pyxine cocois (Sw.) Nyl. ヒイロクロボシゴケ | — | — | — | — | — | No | — | — | — | 0 | 1 | 9 | 1/27 (3.7%) | 8/231 (3.5%) | — |
| DD 情報不足 | Pyxine meissneriana Nyl. ミナミクロボシゴケ | — | — | — | — | — | No | — | — | — | 0 | 1 | 9 | 1/27 (3.7%) | 8/231 (3.5%) | — |
| DD 情報不足 | Relicina sydneyensis (Gyeln.) Hale キフトネゴケモドキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 89 | 0/11 (0.0%) | 74/1665 (4.4%) | — |
| DD 情報不足 | Sclerophora amabilis (Tibell) Tibell サビクギゴケ | — | ✓ | ✓ | ✓ | — | Yes (1) | Scaffold, Reference | 25.0 Mbp 911.0x | 293 134 kbp | 1 | 1 | 2 | 1/6 (16.7%) | 2/36 (5.6%) | 2022-11-07 |
| DD 情報不足 | Sclerophora coniophaea (Norman) Mattsson & Middelb. コフキサビクギゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/6 (16.7%) | 2/36 (5.6%) | — |
| DD 情報不足 | Strigula nemathora Mont. ツブマンジュウゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/54 (0.0%) | — |
| DD 情報不足 | Strigula obducta (Müll.Arg.) R.C.Harris コミノマンジュウゴケ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/29 (0.0%) | 0/54 (0.0%) | — |
| DD 情報不足 | Strigula subelegans Vain. クロミアオバゴケ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/29 (0.0%) | 0/54 (0.0%) | — |
| DD 情報不足 | Thyrea confusa Henssen イシバイキノリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/4 (0.0%) | 5/57 (8.8%) | — |
| DD 情報不足 | Tricharia kashiwadanii G.Thor et al. ヨウジョウクロヒゲモドキ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/19 (0.0%) | 11/840 (1.3%) | — |
| DD 情報不足 | Trypetheliopsis boninensis Asahina アカチクビゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/22 (0.0%) | — |
| DD 情報不足 | Trypetheliopsis epiphylla (R. Sant.) Aptroot バショウゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/22 (0.0%) | — |
| DD 情報不足 | Usnea fuscorubens Motyka ハナサルオガセモドキ | — | — | ✓ | ✓ | — | No | — | — | — | 0 | 13 | 89 | 12/234 (5.1%) | 74/1665 (4.4%) | — |
| DD 情報不足 | Usnea glabrescens (Vain.) Vain. オニヒゲサルオガセ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 13 | 89 | 12/234 (5.1%) | 74/1665 (4.4%) | — |
| DD 情報不足 | Usnea himantodes Stirt. シコクサルオガセ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 13 | 89 | 12/234 (5.1%) | 74/1665 (4.4%) | — |
| DD 情報不足 | Usnea schadenbergiana Göpp & Stein ニセヨコワサルオガセ | — | — | ✓ | ✓ | — | No | — | — | — | 0 | 13 | 89 | 12/234 (5.1%) | 74/1665 (4.4%) | — |