Genome sequence data availability
for the Japanese Red Lists
Updated on 2024-09-02
This page shows only entries from the "Corals" Red List section. This table is also available in TSV format.
This page shows only entries from the "Corals" Red List section. This table is also available in TSV format.
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| EX 絶滅 | Boninastrea boninensis オガサワラサンゴ | DD | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| EN 絶滅危惧IB類 | Euphyllia paraglabrescens ハナサンゴモドキ | VU | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/4 (0.0%) | 2/104 (1.9%) | — |
| VU 絶滅危惧II類 | Acropora pruinosa エダミドリイシ | DD | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 32 | 45 | 20/380 (5.3%) | 29/517 (5.6%) | — |
| VU 絶滅危惧II類 | Porites okinawensis オキナワハマサンゴ | VU | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 14 | 14 | 8/387 (2.1%) | 8/450 (1.8%) | — |
| VU 絶滅危惧II類 | Leptoseris amitoriensis アミトリセンベイサンゴ | NT | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/49 (0.0%) | 1/161 (0.6%) | — |
| VU 絶滅危惧II類 | Trachyphyllia geoffroyi ヒユサンゴ | NT | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 8 | 0/1 (0.0%) | 5/171 (2.9%) | — |
| VU 絶滅危惧II類 | Catalaphyllia jardinei オオナガレハナサンゴ | VU | ✓ | ✓ | ✓ | ✓ | Yes (1) | Chromosome, Representative | 651 Mbp 78.9x | 70,828 20.6 kbp | 1 | 1 | 2 | 1/1 (100.0%) | 2/104 (1.9%) | 2022-06-07 |
| NT 準絶滅危惧 | Acropora echinata トゲヅツミドリイシ | VU | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Representative | 401 Mbp 211.0x | 28,820 24.4 kbp | 1 | 32 | 45 | 20/380 (5.3%) | 29/517 (5.6%) | 2020-09-04 |
| NT 準絶滅危惧 | Acropora grandis クロマツミドリイシ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 32 | 45 | 20/380 (5.3%) | 29/517 (5.6%) | — |
| NT 準絶滅危惧 | Alveopora japonica ニホンアワサンゴ | VU | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 14 | 0/17 (0.0%) | 8/450 (1.8%) | — |
| NT 準絶滅危惧 | Stylaraea punctata ヒメサンゴ | DD | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 14 | 0/1 (0.0%) | 8/450 (1.8%) | — |
| NT 準絶滅危惧 | Cycloseris hexagonalis ムツカドマンジュウイシ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/78 (0.0%) | — |
| NT 準絶滅危惧 | Heliofungia actiniformis パラオクサビライシ | VU | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/78 (0.0%) | — |
| NT 準絶滅危惧 | Galaxea horrescens エダアザミサンゴ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 2 | 1/14 (7.1%) | 1/18 (5.6%) | — |
| DD 情報不足 | Rhizotrochus typus ウチウラタコアシサンゴ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/50 (0.0%) | — |