Genome sequence data availability
for the Japanese Red Lists
Updated on 2025-05-01
This page shows only entries with the "EW" conservation status. This table is also available in TSV format.
This page shows only entries with the "EW" conservation status. This table is also available in TSV format.
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| EW 野生絶滅 | Oncorhynchus kawamurae クニマス | EW | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 25 | 70 | 9/42 (21.4%) | 26/679 (3.8%) | — |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| EW 野生絶滅 | Magnolia pseudokobus コブシモドキ | DD | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 6 | 7 | 6/279 (2.2%) | 7/288 (2.4%) | — |
| EW 野生絶滅 | Malus hupehensis ツクシカイドウ | LC | ✓ | ✓ | ✓ | ✓ | Yes (1) | Chromosome, Reference | 1.17 Gbp 42.63 | 804 10.5 Mbp | 1 | 140 | 324 | 35/94 (37.2%) | 114/3835 (3.0%) | 2025-01-27 |
| EW 野生絶滅 | Kalanchoe spathulata リュウキュウベンケイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 8 | 1/102 (1.0%) | 6/1210 (0.5%) | — |
| EW 野生絶滅 | Astragalus sikokianus ナルトオウギ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 6 | 368 | 3/1609 (0.2%) | 153/16164 (0.9%) | — |
| EW 野生絶滅 | Viola stoloniflora オリヅルスミレ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 7 | 7 | 4/410 (1.0%) | 4/647 (0.6%) | — |
| EW 野生絶滅 | Lycoris sanguinea var. koreana ムジナノカミソリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 9 | 0/34 (0.0%) | 5/1499 (0.3%) | — |
| EW 野生絶滅 | Eriocaulon heleocharioides コシガヤホシクサ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/153 (0.7%) | 1/501 (0.2%) | — |
| EW 野生絶滅 | Liparis uchiyamae キノエササラン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/141 (0.0%) | 23/11639 (0.2%) | — |
| EW 野生絶滅 | Thelypteris aurita ハイミミガタシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/11 (0.0%) | 0/636 (0.0%) | — |
| EW 野生絶滅 | Arachniodes yasu-inouei var. angustipinnula コバヤシカナワラビ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/99 (0.0%) | 4/1410 (0.3%) | — |
| EW 野生絶滅 | Dryopteris shibipedis シビイタチシダ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 1 | 4 | 1/419 (0.2%) | 4/1410 (0.3%) | — |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| EW 野生絶滅 | Nitella furcata (Roxburgh ex Bruzelius) C.Agardh var. fallosa (Morioka) Imahori テガヌマフラスコモ | — | — | — | — | — | No | — | — | — | 0 | 0 | 1 | 0/64 (0.0%) | 1/193 (0.5%) | — |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| EW 野生絶滅 | Cunninghamella homothallica Komin. & Tubaki ドウタイクスダマカビ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 7 | 16 | 5/63 (7.9%) | 14/241 (5.8%) | — |