Genome sequence data availability
for the Japanese Red Lists
Updated on 2025-05-01
This page shows only entries with the "CR" conservation status. This table is also available in TSV format.
This page shows only entries with the "CR" conservation status. This table is also available in TSV format.
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Mogera uchidai センカクモグラ | VU | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 9 | 0/10 (0.0%) | 8/106 (7.5%) | — |
| CR 絶滅危惧IA類 | Pteropus dasymallus daitoensis ダイトウオオコウモリ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 17 | 4/59 (6.8%) | 13/186 (7.0%) | — |
| CR 絶滅危惧IA類 | Pteropus dasymallus dasymallus エラブオオコウモリ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 17 | 4/59 (6.8%) | 13/186 (7.0%) | — |
| CR 絶滅危惧IA類 | Myotis formosus クロアカコウモリ | NT | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 21 | 58 | 13/375 (3.5%) | 32/888 (3.6%) | — |
| CR 絶滅危惧IA類 | Myotis yanbarensis ヤンバルホオヒゲコウモリ | CR | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 21 | 58 | 13/375 (3.5%) | 32/888 (3.6%) | — |
| CR 絶滅危惧IA類 | Apodemus agrarius セスジネズミ | LC | ✓ | ✓ | ✓ | ✓ | Yes (1) | Chromosome, Reference | 2.61 Gbp 70 | 242 35.2 Mbp | 1 | 6 | 151 | 3/36 (8.3%) | 38/1185 (3.2%) | 2024-04-12 |
| CR 絶滅危惧IA類 | Tokudaia muenninki オキナワトゲネズミ | CR | ✓ | ✓ | ✓ | ✓ | Yes (3) | Scaffold, Reference | 3.67 Gbp 100 | 53 138 Mbp | 3 | 6 | 151 | 3/3 (100.0%) | 38/1185 (3.2%) | 2023-09-08 |
| CR 絶滅危惧IA類 | Prionailurus bengalensis euptilurus ツシマヤマネコ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, — | 2.42 Gbp 100 | 319,281 20.4 kbp | 3 | 7 | 63 | 3/5 (60.0%) | 22/56 (39.3%) | 2020-09-15 |
| CR 絶滅危惧IA類 | Prionailurus bengalensis iriomotensis イリオモテヤマネコ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 2.38 Gbp 87 | 194,533 27.8 kbp | 1 | 7 | 63 | 3/5 (60.0%) | 22/56 (39.3%) | 2021-03-31 |
| CR 絶滅危惧IA類 | Enhydra lutris ラッコ | EN | ✓ | ✓ | ✓ | ✓ | Yes (4) | Scaffold, Reference | 2.46 Gbp 110 | 29,591 245 kbp | 4 | 4 | 71 | 1/1 (100.0%) | 23/72 (31.9%) | 2017-09-11 |
| CR 絶滅危惧IA類 | Zalophus japonicus ニホンアシカ | EX | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 4 | 14 | 1/3 (33.3%) | 5/16 (31.2%) | — |
| CR 絶滅危惧IA類 | Dugong dugon ジュゴン | VU | ✓ | ✓ | ✓ | ✓ | Yes (5) | Chromosome, Reference | 3.16 Gbp 32 | 294 57.6 Mbp | 5 | 5 | 6 | 1/1 (100.0%) | 2/2 (100.0%) | 2020-08-31 |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Anser caerulescens caerulescens ハクガン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 18 | 154 | 6/15 (40.0%) | 82/211 (38.9%) | — |
| CR 絶滅危惧IA類 | Branta hutchinsii leucopareia シジュウカラガン | — | — | ✓ | ✓ | ✓ | No | — | — | — | 1 | 7 | 154 | 3/9 (33.3%) | 82/211 (38.9%) | — |
| CR 絶滅危惧IA類 | Columba janthina nitens アカガシラカラスバト | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 1.08 Gbp 60 | 32,051 110 kbp | 1 | 12 | 26 | 4/38 (10.5%) | 11/354 (3.1%) | 2020-08-22 |
| CR 絶滅危惧IA類 | Puffinus bryani オガサワラヒメミズナギドリ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 8 | 2/33 (6.1%) | 6/114 (5.3%) | — |
| CR 絶滅危惧IA類 | Oceanodroma castro クロコシジロウミツバメ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 0 | 2/16 (12.5%) | 0 | — |
| CR 絶滅危惧IA類 | Ciconia boyciana コウノトリ | EN | ✓ | ✓ | ✓ | ✓ | Yes (3) | Chromosome, Reference | 1.24 Gbp 81 | 429 35.8 Mbp | 3 | 12 | 17 | 7/8 (87.5%) | 12/66 (18.2%) | 2019-05-08 |
| CR 絶滅危惧IA類 | Phalacrocorax urile チシマウガラス | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 9 | 9 | 6/21 (28.6%) | 6/43 (14.0%) | — |
| CR 絶滅危惧IA類 | Ixobrychus eurhythmus オオヨシゴイ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 12 | 0/10 (0.0%) | 9/67 (13.4%) | — |
| CR 絶滅危惧IA類 | Nipponia nippon トキ | EN | ✓ | ✓ | ✓ | ✓ | Yes (3) | Scaffold, Reference | 1.22 Gbp 105 | 130,029 29.1 kbp | 3 | 3 | 12 | 1/1 (100.0%) | 8/30 (26.7%) | 2014-06-16 |
| CR 絶滅危惧IA類 | Gallirallus okinawae ヤンバルクイナ | EN | ✓ | ✓ | ✓ | ✓ | Yes (2) | Scaffold, Reference | 1.18 Gbp 100 | 440 20.7 Mbp | 2 | 4 | 23 | 3/10 (30.0%) | 15/145 (10.3%) | 2019-05-11 |
| CR 絶滅危惧IA類 | Eurynorhynchus pygmeus ヘラシギ | CR | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 1.18 Gbp 38 | 44,335 189 kbp | 1 | 20 | 56 | 14/24 (58.3%) | 44/89 (49.4%) | 2018-10-30 |
| CR 絶滅危惧IA類 | Tringa guttifer カラフトアオアシシギ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 56 | 5/16 (31.2%) | 44/89 (49.4%) | — |
| CR 絶滅危惧IA類 | Fratercula cirrhata エトピリカ | LC | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 1.11 Gbp 85 | 111,227 19.7 kbp | 1 | 4 | 12 | 2/3 (66.7%) | 7/23 (30.4%) | 2020-08-22 |
| CR 絶滅危惧IA類 | Synthliboramphus antiquus ウミスズメ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 12 | 0/4 (0.0%) | 7/23 (30.4%) | — |
| CR 絶滅危惧IA類 | Uria aalge inornata ウミガラス | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, — | 1.04 Gbp 74 | 104,657 19.4 kbp | 2 | 3 | 12 | 2/2 (100.0%) | 7/23 (30.4%) | 2020-08-22 |
| CR 絶滅危惧IA類 | Spilornis cheela perplexus カンムリワシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 179 | 1/13 (7.7%) | 145/275 (52.7%) | — |
| CR 絶滅危惧IA類 | Aegolius funereus magnus キンメフクロウ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 1 | 1 | 49 | 1/4 (25.0%) | 37/183 (20.2%) | — |
| CR 絶滅危惧IA類 | Bubo bubo ワシミミズク | LC | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 1.26 Gbp 104 | 133,317 37.1 kbp | 1 | 8 | 49 | 4/18 (22.2%) | 37/183 (20.2%) | 2020-02-04 |
| CR 絶滅危惧IA類 | Ketupa blakistoni blakistoni シマフクロウ | — | — | ✓ | — | ✓ | No | — | — | — | 1 | 8 | 49 | 4/18 (22.2%) | 37/183 (20.2%) | — |
| CR 絶滅危惧IA類 | Picoides tridactylus inouyei ミユビゲラ | — | — | — | ✓ | ✓ | No | — | — | — | 1 | 1 | 16 | 1/5 (20.0%) | 11/223 (4.9%) | — |
| CR 絶滅危惧IA類 | Sapheopipo noguchii ノグチゲラ | EN | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 1.13 Gbp 74 | 179,014 18.5 kbp | 1 | 1 | 16 | 1/14 (7.1%) | 11/223 (4.9%) | 2019-02-16 |
| CR 絶滅危惧IA類 | Lanius tigrinus チゴモズ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 4 | 4 | 4/30 (13.3%) | 4/34 (11.8%) | — |
| CR 絶滅危惧IA類 | Chloris sinica kittlitzi オガサワラカワラヒワ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 91 | 0/5 (0.0%) | 49/291 (16.8%) | — |
| CR 絶滅危惧IA類 | Emberiza aureola ornata シマアオジ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 6 | 91 | 5/44 (11.4%) | 49/291 (16.8%) | — |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Goniurosaurus kuroiwae orientalis マダラトカゲモドキ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/27 (0.0%) | 2/47 (4.3%) | — |
| CR 絶滅危惧IA類 | Goniurosaurus kuroiwae toyamai イヘヤトカゲモドキ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/27 (0.0%) | 2/47 (4.3%) | — |
| CR 絶滅危惧IA類 | Goniurosaurus kuroiwae yamashinae クメトカゲモドキ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/27 (0.0%) | 2/47 (4.3%) | — |
| CR 絶滅危惧IA類 | Takydromus toyamai ミヤコカナヘビ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 48 | 0/24 (0.0%) | 25/406 (6.2%) | — |
| CR 絶滅危惧IA類 | Opisthotropis kikuzatoi キクザトサワヘビ | CR | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 71 | 0/22 (0.0%) | 57/1040 (5.5%) | — |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Hynobius abei アベサンショウウオ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/88 (0.0%) | 0/132 (0.0%) | — |
| CR 絶滅危惧IA類 | Hynobius amakusaensis アマクササンショウウオ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/88 (0.0%) | 0/132 (0.0%) | — |
| CR 絶滅危惧IA類 | Hynobius mikawaensis ミカワサンショウウオ | CR | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/88 (0.0%) | 0/132 (0.0%) | — |
| CR 絶滅危惧IA類 | Hynobius tosashimizuensis トサシミズサンショウウオ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/88 (0.0%) | 0/132 (0.0%) | — |
| CR 絶滅危惧IA類 | Onychodactylus tsukubaensis ツクバハコネサンショウウオ | CR | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/13 (0.0%) | 0/132 (0.0%) | — |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Echidna rhodochilus ナミダカワウツボ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/9 (0.0%) | 2/198 (1.0%) | — |
| CR 絶滅危惧IA類 | Uropterygius concolor コゲウツボ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/16 (0.0%) | 2/198 (1.0%) | — |
| CR 絶滅危惧IA類 | Acheilognathus cyanostigma イチモンジタナゴ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/48 (2.1%) | 2/110 (1.8%) | — |
| CR 絶滅危惧IA類 | Acheilognathus longipinnis イタセンパラ | EN | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 814 Mbp 65 | 73,939 20.7 kbp | 1 | 1 | 2 | 1/48 (2.1%) | 2/110 (1.8%) | 2024-05-30 |
| CR 絶滅危惧IA類 | Acheilognathus tabira jordani ミナミアカヒレタビラ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/48 (2.1%) | 2/110 (1.8%) | — |
| CR 絶滅危惧IA類 | Acheilognathus tabira nakamurae セボシタビラ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/48 (2.1%) | 2/110 (1.8%) | — |
| CR 絶滅危惧IA類 | Acheilognathus typus ゼニタナゴ | VU | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/48 (2.1%) | 2/110 (1.8%) | — |
| CR 絶滅危惧IA類 | Aphyocypris chinensis ヒナモロコ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 42 | 0/9 (0.0%) | 21/210 (10.0%) | — |
| CR 絶滅危惧IA類 | Carassius sp. フナ属の１種（琉球列島） | — | ✓ | — | — | — | No | — | — | — | 0 | 15 | 99 | 4/49 (8.2%) | 58/2364 (2.5%) | — |
| CR 絶滅危惧IA類 | Gnathopogon caerulescens ホンモロコ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 17 | 0/13 (0.0%) | 11/349 (3.2%) | — |
| CR 絶滅危惧IA類 | Ischikauia steenackeri ワタカ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 42 | 0/1 (0.0%) | 21/210 (10.0%) | — |
| CR 絶滅危惧IA類 | Pseudorasbora pugnax ウシモツゴ | VU | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 17 | 2/7 (28.6%) | 11/349 (3.2%) | — |
| CR 絶滅危惧IA類 | Pseudorasbora pumila シナイモツゴ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 17 | 2/7 (28.6%) | 11/349 (3.2%) | — |
| CR 絶滅危惧IA類 | Rhodeus atremius suigensis スイゲンゼニタナゴ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/50 (2.0%) | 2/110 (1.8%) | — |
| CR 絶滅危惧IA類 | Rhodeus ocellatus kurumeus ニッポンバラタナゴ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/50 (2.0%) | 2/110 (1.8%) | — |
| CR 絶滅危惧IA類 | Sarcocheilichthys biwaensis アブラヒガイ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 17 | 0/15 (0.0%) | 11/349 (3.2%) | — |
| CR 絶滅危惧IA類 | Tanakia tanago ミヤコタナゴ | EN | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/1 (0.0%) | 2/110 (1.8%) | — |
| CR 絶滅危惧IA類 | Cobitis minamorii minamorii サンヨウコガタスジシマドジョウ | — | ✓ | — | — | — | No | — | — | — | 0 | 2 | 13 | 2/239 (0.8%) | 5/457 (1.1%) | — |
| CR 絶滅危惧IA類 | Cobitis minamorii yodoensis ヨドコガタスジシマドジョウ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 13 | 2/239 (0.8%) | 5/457 (1.1%) | — |
| CR 絶滅危惧IA類 | Cobitis striata hakataensis ハカタスジシマドジョウ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 13 | 2/239 (0.8%) | 5/457 (1.1%) | — |
| CR 絶滅危惧IA類 | Cobitis takenoi タンゴスジシマドジョウ | CR | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 2 | 13 | 2/239 (0.8%) | 5/457 (1.1%) | — |
| CR 絶滅危惧IA類 | Parabotia curtus アユモドキ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/8 (0.0%) | 6/66 (9.1%) | — |
| CR 絶滅危惧IA類 | Plecoglossus altivelis ryukyuensis リュウキュウアユ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 4 | 4 | 4 | 1/1 (100.0%) | 1/1 (100.0%) | — |
| CR 絶滅危惧IA類 | Neosalanx reganius アリアケヒメシラウオ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 8 | 2/30 (6.7%) | 7/56 (12.5%) | — |
| CR 絶滅危惧IA類 | Salanx ariakensis アリアケシラウオ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 8 | 1/5 (20.0%) | 7/56 (12.5%) | — |
| CR 絶滅危惧IA類 | Oncorhynchus nerka ベニザケ（ヒメマス） | LC | ✓ | ✓ | ✓ | ✓ | Yes (2) | Chromosome, Reference | 2.65 Gbp 23 | 15,727 2.84 Mbp | 2 | 25 | 70 | 9/42 (21.4%) | 26/679 (3.8%) | 2019-06-07 |
| CR 絶滅危惧IA類 | Monopterus sp. タウナギ属の１種（琉球列島） | — | — | — | — | — | No | — | — | — | 0 | 1 | 1 | 1/9 (11.1%) | 1/72 (1.4%) | — |
| CR 絶滅危惧IA類 | Gasterosteus aculeatus subsp. 2 ハリヨ | — | — | — | — | — | No | — | — | — | 10 | 11 | 20 | 2/9 (22.2%) | 6/58 (10.3%) | — |
| CR 絶滅危惧IA類 | Pungitius sp. 3 トミヨ属雄物型 | — | — | — | — | — | No | — | — | — | 0 | 5 | 20 | 2/46 (4.3%) | 6/58 (10.3%) | — |
| CR 絶滅危惧IA類 | Pungitius sp. 4 ムサシトミヨ | — | — | — | — | — | No | — | — | — | 0 | 5 | 20 | 2/46 (4.3%) | 6/58 (10.3%) | — |
| CR 絶滅危惧IA類 | Microphis argulus ホシイッセンヨウジ | LC | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 42 | 0/3 (0.0%) | 25/605 (4.1%) | — |
| CR 絶滅危惧IA類 | Microphis jagorii ヒメテングヨウジ | DD | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 42 | 1/3 (33.3%) | 25/605 (4.1%) | — |
| CR 絶滅危惧IA類 | Microphis retzii タニヨウジ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 42 | 0/14 (0.0%) | 25/605 (4.1%) | — |
| CR 絶滅危惧IA類 | Cestraeus plicatilis カワボラ | DD | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 9 | 0/3 (0.0%) | 6/366 (1.6%) | — |
| CR 絶滅危惧IA類 | Tetraroge barbata アゴヒゲオコゼ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/1 (0.0%) | 1/27 (3.7%) | — |
| CR 絶滅危惧IA類 | Tetraroge nigra ヒゲソリオコゼ | LC | — | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 1 | 0/1 (0.0%) | 1/27 (3.7%) | — |
| CR 絶滅危惧IA類 | Yarica hyalosoma カガミテンジクダイ | LC | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 1.03 Gbp 135 | 168,358 10.6 kbp | 1 | 4 | 24 | 4/121 (3.3%) | 22/590 (3.7%) | 2024-03-19 |
| CR 絶滅危惧IA類 | Lutjanus goldiei ウラウチフエダイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 10 | 3/122 (2.5%) | 7/330 (2.1%) | — |
| CR 絶滅危惧IA類 | Sillago parvisquamis アオギス | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/110 (0.0%) | 0/119 (0.0%) | — |
| CR 絶滅危惧IA類 | Toxotes jaculatrix テッポウウオ | LC | ✓ | ✓ | ✓ | ✓ | Yes (2) | Chromosome, Reference | 622 Mbp 60 | 194 15.6 Mbp | 2 | 5 | 5 | 3/7 (42.9%) | 3/7 (42.9%) | 2021-04-15 |
| CR 絶滅危惧IA類 | Mesopristes argenteus ニセシマイサキ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/3 (0.0%) | 6/56 (10.7%) | — |
| CR 絶滅危惧IA類 | Mesopristes cancellatus ヨコシマイサキ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/3 (0.0%) | 6/56 (10.7%) | — |
| CR 絶滅危惧IA類 | Mesopristes iravi シミズシマイサキ | DD | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/3 (0.0%) | 6/56 (10.7%) | — |
| CR 絶滅危惧IA類 | Enneapterygius cheni ウラウチヘビギンポ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/103 (0.0%) | 1/261 (0.4%) | — |
| CR 絶滅危惧IA類 | Omobranchus ferox カワギンポ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 9 | 0/45 (0.0%) | 6/470 (1.3%) | — |
| CR 絶滅危惧IA類 | Omox biporos ヒルギギンポ | LC | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Rhyacichthys aspro ツバサハゼ | DD | ✓ | ✓ | ✓ | ✓ | Yes (1) | Chromosome, Reference | 595 Mbp 28 | 3,182 1.67 Mbp | 1 | 1 | 1 | 1/2 (50.0%) | 1/3 (33.3%) | 2024-11-08 |
| CR 絶滅危惧IA類 | Butis amboinensis ヤエヤマノコギリハゼ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 16 | 0/11 (0.0%) | 13/289 (4.5%) | — |
| CR 絶滅危惧IA類 | Bathygobius sp. カワクモハゼ | — | ✓ | — | — | — | No | — | — | — | 0 | 0 | 35 | 0/34 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Callogobius sp. ミスジハゼ | — | ✓ | — | — | — | No | — | — | — | 0 | 0 | 35 | 0/23 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Cristatogobius aurimaculatus ヒメトサカハゼ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/2 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Cristatogobius nonatoae クロトサカハゼ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/2 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Eviota ocellifer ウラウチイソハゼ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/192 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Glossogobius aureus コンジキハゼ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/75 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Glossogobius bicirrhosus アゴヒゲハゼ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/75 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Gymnogobius isaza イサザ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/25 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Gymnogobius nakamurae コシノハゼ | — | — | ✓ | — | — | No | — | — | — | 0 | 0 | 35 | 0/25 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Gymnogobius sp. 2 ホクリクジュズカケハゼ | — | — | — | — | — | No | — | — | — | 0 | 0 | 35 | 0/25 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Lentipes armatus ヨロイボウズハゼ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/14 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Luciogobius albus ドウクツミミズハゼ | CR | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/40 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Oxyurichthys takagi シマサルハゼ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/21 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Rhinogobius sp. BB アオバラヨシノボリ | — | ✓ | — | — | — | No | — | — | — | 0 | 1 | 35 | 1/127 (0.8%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Scartelaos histophorus トカゲハゼ | LC | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 695 Mbp 72 | 209,353 8.81 kbp | 1 | 1 | 35 | 1/7 (14.3%) | 24/2548 (0.9%) | 2014-12-02 |
| CR 絶滅危惧IA類 | Sicyopus zosterophorus アカボウズハゼ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/9 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Smilosicyopus leprurus カエルハゼ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/6 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Stiphodon alcedo ヒスイボウズハゼ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/29 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Stiphodon atropurpureus コンテリボウズハゼ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/29 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Stiphodon imperiorientis ハヤセボウズハゼ | VU | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/29 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Parioglossus interruptus ヒメサツキハゼ | LC | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/11 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Parioglossus taeniatus コマチハゼ | LC | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 35 | 0/11 (0.0%) | 24/2548 (0.9%) | — |
| CR 絶滅危惧IA類 | Macropodus opercularis タイワンキンギョ | LC | ✓ | ✓ | ✓ | ✓ | Yes (2) | Chromosome, Reference | 483 Mbp 150 | 151 19.2 Mbp | 2 | 2 | 8 | 1/8 (12.5%) | 3/169 (1.8%) | 2023-05-15 |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Erythromma humerale アカメイトトンボ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 9 | 0/4 (0.0%) | 4/888 (0.5%) | — |
| CR 絶滅危惧IA類 | Indolestes boninensis オガサワラアオイトトンボ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/6 (0.0%) | 0/85 (0.0%) | — |
| CR 絶滅危惧IA類 | Hemicordulia ogasawarensis オガサワラトンボ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/7 (0.0%) | 0/196 (0.0%) | — |
| CR 絶滅危惧IA類 | Libellula angelina ベッコウトンボ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/21 (0.0%) | 5/631 (0.8%) | — |
| CR 絶滅危惧IA類 | Orthetrum poecilops ミヤジマトンボ | VU | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/35 (0.0%) | 5/631 (0.8%) | — |
| CR 絶滅危惧IA類 | Celes akitanus アカハネバッタ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 10 | 0/3 (0.0%) | 8/1880 (0.4%) | — |
| CR 絶滅危惧IA類 | Ogasawaracris gloriosus マボロシオオバッタ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Oxya ogasawarensis オガサワライナゴ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 10 | 0/17 (0.0%) | 8/1880 (0.4%) | — |
| CR 絶滅危惧IA類 | Platypleura albivannata イシガキニイニイ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/61 (0.0%) | 3/1229 (0.2%) | — |
| CR 絶滅危惧IA類 | Diplonychus rusticus タイワンコオイムシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/12 (0.0%) | 1/235 (0.4%) | — |
| CR 絶滅危惧IA類 | Lethocerus indicus タイワンタガメ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 427 Mbp 60 | 502 5.90 Mbp | 1 | 1 | 1 | 1/16 (6.2%) | 1/235 (0.4%) | 2021-09-01 |
| CR 絶滅危惧IA類 | Laccotrephes grossus タイワンタイコウチ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 1 | 0/11 (0.0%) | 1/55 (1.8%) | — |
| CR 絶滅危惧IA類 | Aphelocheirus kawamurae カワムラナベブタムシ | — | — | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/16 (0.0%) | 0/16 (0.0%) | — |
| CR 絶滅危惧IA類 | Carabus arrowianus kirimurai ミカワオサムシ御浜町亜種 | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 4 | 38 | 3/432 (0.7%) | 23/6461 (0.4%) | — |
| CR 絶滅危惧IA類 | Chlaenius praefectus アオヘリアオゴミムシ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 38 | 0/50 (0.0%) | 23/6461 (0.4%) | — |
| CR 絶滅危惧IA類 | Cylindera bonina オガサワラハンミョウ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 38 | 0/67 (0.0%) | 23/6461 (0.4%) | — |
| CR 絶滅危惧IA類 | Oodes virens オオヒラタトックリゴミムシ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 38 | 0/5 (0.0%) | 23/6461 (0.4%) | — |
| CR 絶滅危惧IA類 | Pterostichus yokohamae ヨコハマナガゴミムシ | — | — | — | ✓ | — | No | — | — | — | 0 | 4 | 38 | 2/289 (0.7%) | 23/6461 (0.4%) | — |
| CR 絶滅危惧IA類 | Copelatus parallelus コセスジゲンゴロウ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/469 (0.0%) | 1/2973 (0.0%) | — |
| CR 絶滅危惧IA類 | Cybister lewisianus マルコガタノゲンゴロウ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 2 | 0/40 (0.0%) | 1/2973 (0.0%) | — |
| CR 絶滅危惧IA類 | Cybister limbatus フチトリゲンゴロウ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 2 | 0/40 (0.0%) | 1/2973 (0.0%) | — |
| CR 絶滅危惧IA類 | Dytiscus sharpi シャープゲンゴロウモドキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/29 (0.0%) | 1/2973 (0.0%) | — |
| CR 絶滅危惧IA類 | Hydaticus thermonectoides マダラシマゲンゴロウ | — | — | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 2 | 0/31 (0.0%) | 1/2973 (0.0%) | — |
| CR 絶滅危惧IA類 | Hyphydrus orientalis ニセコケシゲンゴロウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/28 (0.0%) | 1/2973 (0.0%) | — |
| CR 絶滅危惧IA類 | Rhantaticus congestus マダラゲンゴロウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/1 (0.0%) | 1/2973 (0.0%) | — |
| CR 絶滅危惧IA類 | Gyrinus ryukyuensis リュウキュウヒメミズスマシ | — | — | ✓ | — | — | No | — | — | — | 0 | 0 | 0 | 0/75 (0.0%) | 0/288 (0.0%) | — |
| CR 絶滅危惧IA類 | Quedius kiuchii リュウノイワヤツヤムネハネカクシ | — | — | — | ✓ | — | No | — | — | — | 0 | 2 | 64 | 1/291 (0.3%) | 51/7024 (0.7%) | — |
| CR 絶滅危惧IA類 | Neolucanus insulicola donan ヨナグニマルバネクワガタ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 6 | 0/34 (0.0%) | 5/393 (1.3%) | — |
| CR 絶滅危惧IA類 | Oryctes hisamatsui ヒサマツサイカブト | — | — | ✓ | ✓ | — | No | — | — | — | 0 | 7 | 62 | 2/14 (14.3%) | 41/4895 (0.8%) | — |
| CR 絶滅危惧IA類 | Chrysobothris boninensis suzukii オガサワラムツボシタマムシ母島亜種 | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/34 (0.0%) | 5/724 (0.7%) | — |
| CR 絶滅危惧IA類 | Tamamushia virida fujitai ツマベニタマムシ聟島亜種 | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Luciola owadai クメジマボタル | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/2 (0.0%) | 7/634 (1.1%) | — |
| CR 絶滅危惧IA類 | Glipa asahinai キンモンオビハナノミ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/432 (0.0%) | — |
| CR 絶滅危惧IA類 | Glipa kurosawai クロサワオビハナノミ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/432 (0.0%) | — |
| CR 絶滅危惧IA類 | Glipa ogasawarensis オガサワラオビハナノミ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/432 (0.0%) | — |
| CR 絶滅危惧IA類 | Hoshihananomia katoi boninensis ニセキボシハナノミ小笠原亜種 | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/4 (0.0%) | 0/432 (0.0%) | — |
| CR 絶滅危惧IA類 | Hoshihananomia kusuii クスイキボシハナノミ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/4 (0.0%) | 0/432 (0.0%) | — |
| CR 絶滅危惧IA類 | Agapanthia japonica フサヒゲルリカミキリ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 31 | 0/15 (0.0%) | 20/3108 (0.6%) | — |
| CR 絶滅危惧IA類 | Boninella anoplos ケズネオガサワラカミキリ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Boninella hirsuta アラゲオガサワラカミキリ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Boninella igai ヒメオガサワラカミキリ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Boninella satoi masatakai サトウオガサワラカミキリ母島亜種 | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Bonipogonius fujitai ヒゲシロアラゲカミキリ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Phytoecia coeruleomicans アオキクスイカミキリ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 31 | 0/18 (0.0%) | 20/3108 (0.6%) | — |
| CR 絶滅危惧IA類 | Xylotrechus takakuwai ミイロトラカミキリ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 31 | 0/60 (0.0%) | 20/3108 (0.6%) | — |
| CR 絶滅危惧IA類 | Donacia frontalis アオノネクイハムシ | — | — | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 106 | 0/61 (0.0%) | 58/6889 (0.8%) | — |
| CR 絶滅危惧IA類 | Ogasawarazo daitoensis ダイトウスジヒメカタゾウムシ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Ogasawarazo rugosicephalus hahajimaensis ヒメカタゾウムシ母島亜種 | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Orussus boninensis オガサワラヤドリキバチ | — | — | — | — | — | No | — | — | — | 0 | 1 | 1 | 1/7 (14.3%) | 1/12 (8.3%) | — |
| CR 絶滅危惧IA類 | Chrysis boninensis オガサワラセイボウ | — | — | — | — | — | No | — | — | — | 0 | 0 | 2 | 0/217 (0.0%) | 1/490 (0.2%) | — |
| CR 絶滅危惧IA類 | Aphaenogaster gamagumayaa ガマアシナガアリ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 10 | 269 | 9/282 (3.2%) | 215/17195 (1.3%) | — |
| CR 絶滅危惧IA類 | Pison tosawai チチジマピソン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 22 | 0/20 (0.0%) | 13/1456 (0.9%) | — |
| CR 絶滅危惧IA類 | Anopheles yatsushiroensis ヤツシロハマダラカ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 115 | 161 | 46/1145 (4.0%) | 66/3759 (1.8%) | — |
| CR 絶滅危惧IA類 | Simulium yonakuniense ヨナクニウォレスブユ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1861 (0.0%) | 0/2206 (0.0%) | — |
| CR 絶滅危惧IA類 | Carterocephalus palaemon akaishianus タカネキマダラセセリ赤石山脈亜種 | — | ✓ | — | ✓ | ✓ | No | — | — | — | 2 | 5 | 476 | 3/15 (20.0%) | 406/3081 (13.2%) | — |
| CR 絶滅危惧IA類 | Pyrgus malvae unomasahiroi ヒメチャマダラセセリ | — | ✓ | ✓ | — | — | No | — | — | — | 2 | 18 | 476 | 9/39 (23.1%) | 406/3081 (13.2%) | — |
| CR 絶滅危惧IA類 | Pieris canidia kaolicola タイワンモンシロチョウ対馬・朝鮮半島亜種 | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 16 | 85 | 6/57 (10.5%) | 40/907 (4.4%) | — |
| CR 絶滅危惧IA類 | Antigius butleri kurinodakensis ウスイロオナガシジミ鹿児島県栗野岳亜種 | — | — | ✓ | — | — | No | — | — | — | 0 | 0 | 103 | 0/2 (0.0%) | 53/2691 (2.0%) | — |
| CR 絶滅危惧IA類 | Celastrina ogasawaraensis オガサワラシジミ | — | ✓ | ✓ | — | — | No | — | — | — | 0 | 2 | 103 | 1/21 (4.8%) | 53/2691 (2.0%) | — |
| CR 絶滅危惧IA類 | Everes lacturnus lacturnus タイワンツバメシジミ名義タイプ亜種, 琉球亜種 | — | — | — | ✓ | — | No | — | — | — | 0 | 8 | 103 | 4/16 (25.0%) | 53/2691 (2.0%) | — |
| CR 絶滅危惧IA類 | Japonica onoi mizobei カシワアカシジミ（キタアカシジミ）冠高原亜種 | — | ✓ | ✓ | — | — | No | — | — | — | 0 | 0 | 103 | 0/5 (0.0%) | 53/2691 (2.0%) | — |
| CR 絶滅危惧IA類 | Phengaris teleius kazamoto ゴマシジミ関東・中部亜種 | — | ✓ | — | — | — | No | — | — | — | 0 | 3 | 103 | 2/11 (18.2%) | 53/2691 (2.0%) | — |
| CR 絶滅危惧IA類 | Pithecops fulgens tsushimanus ツシマウラボシシジミ | — | ✓ | — | — | — | No | — | — | — | 0 | 0 | 103 | 0/4 (0.0%) | 53/2691 (2.0%) | — |
| CR 絶滅危惧IA類 | Plebejus subsolanus iburiensis アサマシジミ北海道亜種 | — | — | — | — | — | No | — | — | — | 0 | 6 | 103 | 4/65 (6.2%) | 53/2691 (2.0%) | — |
| CR 絶滅危惧IA類 | Shijimia moorei moorei ゴイシツバメシジミ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 103 | 0/1 (0.0%) | 53/2691 (2.0%) | — |
| CR 絶滅危惧IA類 | Shijimiaeoides divinus barine オオルリシジミ本州亜種 | — | — | ✓ | — | — | No | — | — | — | 0 | 0 | 103 | 0/1 (0.0%) | 53/2691 (2.0%) | — |
| CR 絶滅危惧IA類 | Coenonympha oedippus annulifer ヒメヒカゲ長野県・群馬県亜種 | — | — | ✓ | — | — | No | — | — | — | 1 | 11 | 782 | 6/36 (16.7%) | 229/5383 (4.3%) | — |
| CR 絶滅危惧IA類 | Fabriciana nerippe オオウラギンヒョウモン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 782 | 1/10 (10.0%) | 229/5383 (4.3%) | — |
| CR 絶滅危惧IA類 | Melitaea protomedia ウスイロヒョウモンモドキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 28 | 782 | 13/150 (8.7%) | 229/5383 (4.3%) | — |
| CR 絶滅危惧IA類 | Melitaea scotosia ヒョウモンモドキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 28 | 782 | 13/150 (8.7%) | 229/5383 (4.3%) | — |
| CR 絶滅危惧IA類 | Oeneis norna sugitanii タカネヒカゲ八ヶ岳亜種 | — | ✓ | ✓ | — | — | No | — | — | — | 0 | 4 | 782 | 2/32 (6.2%) | 229/5383 (4.3%) | — |
| CR 絶滅危惧IA類 | Sebastosema bubonaria カバシタムクゲエダシャク | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Oxytrypia orbiculosa ミヨタトラヨトウ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Sideridis incommoda アサギリヨトウ（キシダムラサキヨトウ） | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 414 | 0/19 (0.0%) | 199/7140 (2.8%) | — |
| CR 絶滅危惧IA類 | Sinocharis korbae ノシメコヤガ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 414 | 0/1 (0.0%) | 199/7140 (2.8%) | — |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Ogasawarana obtusa ミガキヤマキサゴ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Chamalycaeus okinawaensis オキナワムシオイ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/8 (0.0%) | 0/16 (0.0%) | — |
| CR 絶滅危惧IA類 | Chamalycaeus sp. イリオモテムシオイ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/262 (0.0%) | — |
| CR 絶滅危惧IA類 | Nobuea sp. ゴトウノブエガイ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Pirenella cancellata ヌノメヘナタリ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/10 (0.0%) | 0/48 (0.0%) | — |
| CR 絶滅危惧IA類 | Angustassiminea sp. A ヘドクリイロカワザンショウ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/7 (0.0%) | 0/65 (0.0%) | — |
| CR 絶滅危惧IA類 | Angustassiminea sp. B ティンダハナタクリイロカワザンショウ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/7 (0.0%) | 0/65 (0.0%) | — |
| CR 絶滅危惧IA類 | Angustassiminea sp. C ウフアガリクリイロカワザンショウ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/7 (0.0%) | 0/65 (0.0%) | — |
| CR 絶滅危惧IA類 | Cavernacmella sp. A ナラオゴマオカチグサ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Cavernacmella sp. B コシキゴマオカチグサ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Cavernacmella sp. C ウフアガリゴマオカチグサ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Paludinellassiminea daitoensis ダイトウオカチグサ (ダイトウヘソカド) | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/65 (0.0%) | — |
| CR 絶滅危惧IA類 | Paludinellassiminea miyakoinsularis ミヤコオカチグサ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/65 (0.0%) | — |
| CR 絶滅危惧IA類 | Paludinellassiminea sp. A タマグスクオカチグサ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/65 (0.0%) | — |
| CR 絶滅危惧IA類 | Paludinellassiminea sp. B ドナンオカチグサ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/1 (0.0%) | 0/65 (0.0%) | — |
| CR 絶滅危惧IA類 | Parafossarulus manchouricus japonicus マメタニシ | — | ✓ | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/4 (0.0%) | 0/37 (0.0%) | — |
| CR 絶滅危惧IA類 | Gammatricula shini ヨナグニカタヤマガイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/5 (0.0%) | 1/99 (1.0%) | — |
| CR 絶滅危惧IA類 | Truncatella oagariensis オカクビキレ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/11 (0.0%) | 0/15 (0.0%) | — |
| CR 絶滅危惧IA類 | Truncatella sp. B アソブイトクビキレ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/11 (0.0%) | 0/15 (0.0%) | — |
| CR 絶滅危惧IA類 | Truncatella sp. C カガヨイクビキレ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/11 (0.0%) | 0/15 (0.0%) | — |
| CR 絶滅危惧IA類 | Truncatella sp. D キザハシクビキレ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/11 (0.0%) | 0/15 (0.0%) | — |
| CR 絶滅危惧IA類 | Truncatella sp. E ロウタキクビキレ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/11 (0.0%) | 0/15 (0.0%) | — |
| CR 絶滅危惧IA類 | Marginellidae gen. &. sp. オカトリノコガイ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/58 (0.0%) | 0/58 (0.0%) | — |
| CR 絶滅危惧IA類 | Mathilda sinensis タクミニナ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Camptoceras hirasei カワネジガイ | DD | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 20 | 0/1 (0.0%) | 7/669 (1.0%) | — |
| CR 絶滅危惧IA類 | Ferrissia nipponica カワコザラ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/22 (0.0%) | 0/221 (0.0%) | — |
| CR 絶滅危惧IA類 | Succinea sp. ダイトウオカモノアラガイ | — | ✓ | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/88 (0.0%) | 0/180 (0.0%) | — |
| CR 絶滅危惧IA類 | Luchuena sp. クメジマキセルモドキ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Megalophaedusa fukudainadai ナルトギセル | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/55 (0.0%) | 1/623 (0.2%) | — |
| CR 絶滅危惧IA類 | Stereophaedusa sp. (Sm) ナタマメギセル（小型） | — | — | — | — | — | No | — | — | — | 0 | 0 | 1 | 0/39 (0.0%) | 1/623 (0.2%) | — |
| CR 絶滅危惧IA類 | Stereophaedusa striatella ミヤコオキナワギセル | — | — | — | — | — | No | — | — | — | 0 | 0 | 1 | 0/39 (0.0%) | 1/623 (0.2%) | — |
| CR 絶滅危惧IA類 | Zaptyx daitojimana ダイトウノミギセル | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/37 (0.0%) | 1/623 (0.2%) | — |
| CR 絶滅危惧IA類 | Cipangocharax ananensis アナンムシオイ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Nesiohelix omphalina bipyramidalis オオアガリマイマイ | — | — | — | — | — | No | — | — | — | 0 | 0 | 4 | 0/7 (0.0%) | 4/1499 (0.3%) | — |
| CR 絶滅危惧IA類 | Nesiohelix omphalina omphalina ヘソアキアツマイマイ | — | — | — | — | — | No | — | — | — | 0 | 0 | 4 | 0/7 (0.0%) | 4/1499 (0.3%) | — |
| CR 絶滅危惧IA類 | Sinohyriopsis schlegelii イケチョウガイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 8 | 1/4 (25.0%) | 8/876 (0.9%) | — |
| CR 絶滅危惧IA類 | Apolymetis meyeri チリメンジュロウジン | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Cyclina sp. ダテオキシジミ | — | — | — | — | — | No | — | — | — | 0 | 1 | 19 | 1/1 (100.0%) | 14/282 (5.0%) | — |
| CR 絶滅危惧IA類 | Borniopsis sp． ヨコヅナケボリ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/66 (0.0%) | — |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Chenopodium bryoniifolium ミドリアカザ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 384 | 13/117 (11.1%) | 28/1277 (2.2%) | — |
| CR 絶滅危惧IA類 | Chenopodium gracilispicum イワアカザ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 384 | 0/7 (0.0%) | 28/1277 (2.2%) | — |
| CR 絶滅危惧IA類 | Salix nummularia エゾマメヤナギ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 32 | 65 | 13/461 (2.8%) | 30/886 (3.4%) | — |
| CR 絶滅危惧IA類 | Betula apoiensis アポイカンバ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 22 | 2/82 (2.4%) | 13/210 (6.2%) | — |
| CR 絶滅危惧IA類 | Celtis biondii var. insularis サキシマエノキ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 24 | 0/73 (0.0%) | 4/126 (3.2%) | — |
| CR 絶滅危惧IA類 | Ficus iidaiana オオヤマイチジク | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 13 | 26 | 7/785 (0.9%) | 15/1209 (1.2%) | — |
| CR 絶滅危惧IA類 | Morus boninensis オガサワラグワ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 26 | 4/30 (13.3%) | 15/1209 (1.2%) | — |
| CR 絶滅危惧IA類 | Elatostema oshimense アマミサンショウソウ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 12 | 0/212 (0.0%) | 4/1107 (0.4%) | — |
| CR 絶滅危惧IA類 | Elatostema yakushimense ヒメトキホコリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 12 | 0/212 (0.0%) | 4/1107 (0.4%) | — |
| CR 絶滅危惧IA類 | Elatostema yonakuniense ヨナクニトキホコリ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 12 | 0/212 (0.0%) | 4/1107 (0.4%) | — |
| CR 絶滅危惧IA類 | Nanocnide pilosa トウカテンソウ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 12 | 0/8 (0.0%) | 4/1107 (0.4%) | — |
| CR 絶滅危惧IA類 | Procris boninensis セキモンウライソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 12 | 0/12 (0.0%) | 4/1107 (0.4%) | — |
| CR 絶滅危惧IA類 | Bistorta hayachinensis ナンブトラノオ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 27 | 0/19 (0.0%) | 15/983 (1.5%) | — |
| CR 絶滅危惧IA類 | Persicaria japonica var. taitoinsularis ダイトウサクラタデ | — | — | — | — | — | No | — | — | — | 0 | 3 | 27 | 2/86 (2.3%) | 15/983 (1.5%) | — |
| CR 絶滅危惧IA類 | Minuartia arctica var. arctica エゾタカネツメクサ | — | — | — | — | — | No | — | — | — | 0 | 0 | 36 | 0/18 (0.0%) | 23/2100 (1.1%) | — |
| CR 絶滅危惧IA類 | Sagina saginoides チシマツメクサ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 36 | 0/30 (0.0%) | 23/2100 (1.1%) | — |
| CR 絶滅危惧IA類 | Silene repens var. apoiensis アポイマンテマ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 10 | 36 | 7/598 (1.2%) | 23/2100 (1.1%) | — |
| CR 絶滅危惧IA類 | Silene tokachiensis トカチビランジ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 10 | 36 | 7/598 (1.2%) | 23/2100 (1.1%) | — |
| CR 絶滅危惧IA類 | Silene uralensis タカネマンテマ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 10 | 36 | 7/598 (1.2%) | 23/2100 (1.1%) | — |
| CR 絶滅危惧IA類 | Stellaria calycantha カンチヤチハコベ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 36 | 0/167 (0.0%) | 23/2100 (1.1%) | — |
| CR 絶滅危惧IA類 | Stellaria nipponica var. yezoensis オオイワツメクサ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 36 | 0/167 (0.0%) | 23/2100 (1.1%) | — |
| CR 絶滅危惧IA類 | Deeringia polysperma インドヒモカズラ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 10 | 0/5 (0.0%) | 6/630 (1.0%) | — |
| CR 絶滅危惧IA類 | Polyalthia liukiuensis クロボウモドキ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/32 (0.0%) | 3/2142 (0.1%) | — |
| CR 絶滅危惧IA類 | Cassytha glabella イトスナヅル | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 18 | 0/11 (0.0%) | 9/1575 (0.6%) | — |
| CR 絶滅危惧IA類 | Illigera luzonensis テングノハナ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/15 (0.0%) | 0/46 (0.0%) | — |
| CR 絶滅危惧IA類 | Aconitum iidemontanum イイデトリカブト | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 23 | 0/227 (0.0%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Aconitum jaluense subsp. jaluense コウライブシ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 23 | 0/227 (0.0%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Aconitum japonicum subsp. maritimum var. iyariense イヤリトリカブト | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 23 | 0/227 (0.0%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Aconitum kitadakense キタダケトリカブト | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 23 | 0/227 (0.0%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Aconitum metajaponicum オンタケブシ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 23 | 0/227 (0.0%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Aconitum senanense subsp. senanense var. isidzukae オオサワトリカブト | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 23 | 0/227 (0.0%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Callianthemum kirigishiense キリギシソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 23 | 0/15 (0.0%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Callianthemum miyabeanum ヒダカソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 23 | 0/15 (0.0%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Clematis obvallata var. obvallata コウヤハンショウヅル | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 0 | 23 | 0/232 (0.0%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Ranunculus pygmaeus クモマキンポウゲ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 6 | 23 | 4/435 (0.9%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Ranunculus ternatus var. lutchuensis リュウキュウヒキノカサ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 6 | 23 | 4/435 (0.9%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Ranunculus yatsugatakensis ヤツガタケキンポウゲ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 6 | 23 | 4/435 (0.9%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Thalictrum minus var. chionophyllum ミョウギカラマツ | — | — | — | ✓ | ✓ | No | — | — | — | 2 | 5 | 23 | 2/139 (1.4%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Thalictrum ujiinsulare ウジカラマツ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 23 | 2/139 (1.4%) | 14/1916 (0.7%) | — |
| CR 絶滅危惧IA類 | Photinia serratifolia オオカナメモチ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 324 | 0/44 (0.0%) | 114/3835 (3.0%) | — |
| CR 絶滅危惧IA類 | Prunus tamaclivorum ホシザクラ | — | — | — | ✓ | — | No | — | — | — | 0 | 58 | 324 | 20/387 (5.2%) | 114/3835 (3.0%) | — |
| CR 絶滅危惧IA類 | Rubus amamianus var. minor コバノアマミフユイチゴ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 13 | 324 | 6/748 (0.8%) | 114/3835 (3.0%) | — |
| CR 絶滅危惧IA類 | Rubus arcticus チシマイチゴ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 13 | 324 | 6/748 (0.8%) | 114/3835 (3.0%) | — |
| CR 絶滅危惧IA類 | Rubus nakaii チチジマイチゴ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 13 | 324 | 6/748 (0.8%) | 114/3835 (3.0%) | — |
| CR 絶滅危惧IA類 | Cocculus orbiculatus ホウザンツヅラフジ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 9 | 0/3 (0.0%) | 8/289 (2.8%) | — |
| CR 絶滅危惧IA類 | Pericampylus formosanus ホウライツヅラフジ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 9 | 0/3 (0.0%) | 8/289 (2.8%) | — |
| CR 絶滅危惧IA類 | Nuphar submersa シモツケコウホネ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/22 (4.5%) | 3/156 (1.9%) | — |
| CR 絶滅危惧IA類 | Piper postelsianum タイヨウフウトウカズラ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 2 | 2/694 (0.3%) | 2/1099 (0.2%) | — |
| CR 絶滅危惧IA類 | Asarum caudigerum オナガサイシン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum dilatatum スエヒロアオイ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum gusk グスクカンアオイ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum hexalobum var. controversum シシキカンアオイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum kinoshitae ジュロウカンアオイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum minamitanianum オナガカンアオイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum mitoanum フクエジマカンアオイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum monodoriflorum モノドラカンアオイ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum muramatsui var. shimodanum シモダカンアオイ | — | — | — | — | — | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum okinawense ヒナカンアオイ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum pellucidum トリガミネカンアオイ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum satsumense サツマアオイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum senkakuinsulare センカクカンアオイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Asarum tabatanum アサトカンアオイ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/163 (0.0%) | 0/164 (0.0%) | — |
| CR 絶滅危惧IA類 | Eurya zigzag クニガミヒサカキ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/73 (0.0%) | 1/226 (0.4%) | — |
| CR 絶滅危惧IA類 | Hypericum senkakuinsulare センカクオトギリ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 10 | 10 | 5/361 (1.4%) | 5/432 (1.2%) | — |
| CR 絶滅危惧IA類 | Hypericum tosaense トサオトギリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 10 | 10 | 5/361 (1.4%) | 5/432 (1.2%) | — |
| CR 絶滅危惧IA類 | Aldrovanda vesiculosa ムジナモ | EN | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/1 (0.0%) | 4/93 (4.3%) | — |
| CR 絶滅危惧IA類 | Arabis ligulifolia ヘラハタザオ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 541 | 0/2 (0.0%) | 108/3409 (3.2%) | — |
| CR 絶滅危惧IA類 | Berteroella maximowiczii ハナナズナ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 541 | 0/8 (0.0%) | 108/3409 (3.2%) | — |
| CR 絶滅危惧IA類 | Dontostemon dentatus ハナハタザオ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 541 | 0/12 (0.0%) | 108/3409 (3.2%) | — |
| CR 絶滅危惧IA類 | Draba igarashii シリベシナズナ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 4 | 541 | 2/330 (0.6%) | 108/3409 (3.2%) | — |
| CR 絶滅危惧IA類 | Draba nakaiana ソウウンナズナ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 4 | 541 | 2/330 (0.6%) | 108/3409 (3.2%) | — |
| CR 絶滅危惧IA類 | Isatis tinctoria ハマタイセイ | — | ✓ | ✓ | ✓ | ✓ | Yes (3) | Chromosome, Reference | 294 Mbp 142.71 | 1,198 1.18 Mbp | 3 | 4 | 541 | 2/40 (5.0%) | 108/3409 (3.2%) | 2019-06-15 |
| CR 絶滅危惧IA類 | Corylopsis gotoana var. pubescens ヒゴミズキ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/21 (0.0%) | 3/103 (2.9%) | — |
| CR 絶滅危惧IA類 | Sedum drymarioides ナナツガママンネングサ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 8 | 1/257 (0.4%) | 6/1210 (0.5%) | — |
| CR 絶滅危惧IA類 | Mitella amamiana アマミチャルメルソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/11 (0.0%) | 4/825 (0.5%) | — |
| CR 絶滅危惧IA類 | Saxifraga bracteata キヨシソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 5 | 2/498 (0.4%) | 4/825 (0.5%) | — |
| CR 絶滅危惧IA類 | Saxifraga nishidae エゾノクモマグサ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 5 | 2/498 (0.4%) | 4/825 (0.5%) | — |
| CR 絶滅危惧IA類 | Saxifraga yuparensis ユウバリクモマグサ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 3 | 5 | 2/498 (0.4%) | 4/825 (0.5%) | — |
| CR 絶滅危惧IA類 | Deutzia hatusimae コミノヒメウツギ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 6 | 0/74 (0.0%) | 1/262 (0.4%) | — |
| CR 絶滅危惧IA類 | Deutzia naseana var. amanoi オキナワヒメウツギ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 6 | 0/74 (0.0%) | 1/262 (0.4%) | — |
| CR 絶滅危惧IA類 | Hydrangea involucrata var. tokarensis トカラタマアジサイ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 6 | 6 | 1/136 (0.7%) | 1/262 (0.4%) | — |
| CR 絶滅危惧IA類 | Ribes horridum クロミノハリスグリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 7 | 7 | 4/139 (2.9%) | 4/139 (2.9%) | — |
| CR 絶滅危惧IA類 | Pittosporum parvifolium コバトベラ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/109 (0.9%) | 1/135 (0.7%) | — |
| CR 絶滅危惧IA類 | Astragalus japonicus エゾモメンヅル | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 6 | 368 | 3/1609 (0.2%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Crotalaria calycina ガクタヌキマメ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 368 | 1/463 (0.2%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Crotalaria montana var. angustifolia ヤエヤマタヌキマメ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 368 | 1/463 (0.2%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Crotalaria uncinella エダウチタヌキマメ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 368 | 1/463 (0.2%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Entada tonkinensis モダマ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 368 | 0/25 (0.0%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Euchresta formosana タイワンミヤマトベラ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 368 | 0/4 (0.0%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Glycine max subsp. formosana ホソバツルマメ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 36 | 44 | 368 | 4/50 (8.0%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Glycine tabacina ボウコツルマメ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 44 | 368 | 4/50 (8.0%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Indigofera kirilowii チョウセンニワフジ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 368 | 0/505 (0.0%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Intsia bijuga タシロマメ | NT | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 368 | 0/7 (0.0%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Pterocarpus vidalianus ヤエヤマシタン | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 368 | 2/52 (3.8%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Sophora franchetiana ツクシムレスズメ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 368 | 1/64 (1.6%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Tadehagi triquetrum タデハギ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 368 | 0/6 (0.0%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Uraria picta ホソバフジボグサ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 368 | 0/9 (0.0%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Vigna vexillata var. vexillata サクヤアカササゲ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 34 | 368 | 9/96 (9.4%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Zornia cantoniensis スナジマメ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 368 | 0/54 (0.0%) | 153/16164 (0.9%) | — |
| CR 絶滅危惧IA類 | Cladopus fukienensis タシロカワゴケソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/14 (0.0%) | 0/404 (0.0%) | — |
| CR 絶滅危惧IA類 | Hydrobryum koribanum オオヨドカワゴロモ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/41 (0.0%) | 0/404 (0.0%) | — |
| CR 絶滅危惧IA類 | Oxalis amamiana アマミカタバミ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 3 | 2/434 (0.5%) | 2/458 (0.4%) | — |
| CR 絶滅危惧IA類 | Geranium shikokianum var. yoshiianum ヤクシマフウロ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 11 | 35 | 9/185 (4.9%) | 29/531 (5.5%) | — |
| CR 絶滅危惧IA類 | Linum stelleroides マツバニンジン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 35 | 35 | 5/118 (4.2%) | 5/170 (2.9%) | — |
| CR 絶滅危惧IA類 | Chamaesyce liukiuensis リュウキュウタイゲキ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 6 | 81 | / | 46/3654 (1.3%) | — |
| CR 絶滅危惧IA類 | Claoxylon centinarium セキモンノキ | — | — | — | — | — | No | — | — | — | 0 | 0 | 81 | 0/10 (0.0%) | 46/3654 (1.3%) | — |
| CR 絶滅危惧IA類 | Croton sp. コバノクスドイゲ | — | ✓ | — | — | — | No | — | — | — | 0 | 3 | 81 | 2/679 (0.3%) | 46/3654 (1.3%) | — |
| CR 絶滅危惧IA類 | Discocleidion ulmifolium エノキフジ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 81 | 0/2 (0.0%) | 46/3654 (1.3%) | — |
| CR 絶滅危惧IA類 | Euphorbia octoradiata ハギクソウ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 22 | 81 | 15/1294 (1.2%) | 46/3654 (1.3%) | — |
| CR 絶滅危惧IA類 | Euphorbia sp. アマミナツトウダイ | — | ✓ | — | — | — | No | — | — | — | 0 | 22 | 81 | 15/1294 (1.2%) | 46/3654 (1.3%) | — |
| CR 絶滅危惧IA類 | Euphorbia watanabei subsp. minamitanii ヒュウガタイゲキ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 22 | 81 | 15/1294 (1.2%) | 46/3654 (1.3%) | — |
| CR 絶滅危惧IA類 | Margaritaria indica アカハダコバンノキ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/8 (0.0%) | 3/877 (0.3%) | — |
| CR 絶滅危惧IA類 | Phyllanthus oligospermus subsp. donanensis ドナンコバンノキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/18 (0.0%) | 3/877 (0.3%) | — |
| CR 絶滅危惧IA類 | Citrus nippokoreana コウライタチバナ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 86 | 101 | 25/203 (12.3%) | 36/1480 (2.4%) | — |
| CR 絶滅危惧IA類 | Tetradium glabrifolium ホソバハマセンダン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 101 | 0/15 (0.0%) | 36/1480 (2.4%) | — |
| CR 絶滅危惧IA類 | Ryssopterys timoriensis ササキカズラ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/6 (0.0%) | 0/734 (0.0%) | — |
| CR 絶滅危惧IA類 | Polygala longifolia リュウキュウヒメハギ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/154 (0.0%) | 0/681 (0.0%) | — |
| CR 絶滅危惧IA類 | Polygala polifolia シンチクヒメハギ | — | — | ✓ | — | — | No | — | — | — | 0 | 0 | 0 | 0/154 (0.0%) | 0/681 (0.0%) | — |
| CR 絶滅危惧IA類 | Rhus javanica var. javanica タイワンフシノキ | — | — | — | — | — | No | — | — | — | 0 | 0 | 3 | 0/7 (0.0%) | 1/118 (0.8%) | — |
| CR 絶滅危惧IA類 | Acer amamiense アマミカジカエデ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 7 | 26 | 4/170 (2.4%) | 12/1116 (1.1%) | — |
| CR 絶滅危惧IA類 | Ilex dimorphophylla アマミヒイラギモチ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 5 | 3/342 (0.9%) | 3/345 (0.9%) | — |
| CR 絶滅危惧IA類 | Ilex macrocarpa ヒロハタマミズキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 5 | 3/342 (0.9%) | 3/345 (0.9%) | — |
| CR 絶滅危惧IA類 | Euonymus oblongifolius ナガバヒゼンマユミ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 4 | 1/93 (1.1%) | 2/735 (0.3%) | — |
| CR 絶滅危惧IA類 | Euonymus oligospermus アンドンマユミ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 4 | 1/93 (1.1%) | 2/735 (0.3%) | — |
| CR 絶滅危惧IA類 | Buxus sinica var. sinica タイワンアサマツゲ | — | — | ✓ | ✓ | — | No | — | — | — | 0 | 2 | 3 | 1/105 (1.0%) | 2/140 (1.4%) | — |
| CR 絶滅危惧IA類 | Nothapodytes amamianus ワダツミノキ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/6 (16.7%) | 1/116 (0.9%) | — |
| CR 絶滅危惧IA類 | Rhamnus kanagusukui ヒメクロウメモドキ | — | — | — | — | — | No | — | — | — | 0 | 0 | 18 | 0/120 (0.0%) | 6/927 (0.6%) | — |
| CR 絶滅危惧IA類 | Vitis romanetii クマガワブドウ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 279 | 281 | 38/247 (15.4%) | 40/843 (4.7%) | — |
| CR 絶滅危惧IA類 | Grewia rhombifolia ヒシバウオトリギ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 134 | 0/109 (0.0%) | 62/2533 (2.4%) | — |
| CR 絶滅危惧IA類 | Tilia mandshurica var. chugokuensis チュウゴクボダイジュ | — | — | — | — | — | No | — | — | — | 0 | 1 | 134 | 1/42 (2.4%) | 62/2533 (2.4%) | — |
| CR 絶滅危惧IA類 | Tilia mandshurica var. mandshurica マンシュウボダイジュ | — | — | — | ✓ | — | No | — | — | — | 0 | 1 | 134 | 1/42 (2.4%) | 62/2533 (2.4%) | — |
| CR 絶滅危惧IA類 | Triumfetta procumbens var. glaberrima ケナシハテルマカズラ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 134 | 0/30 (0.0%) | 62/2533 (2.4%) | — |
| CR 絶滅危惧IA類 | Abelmoschus moschatus var. betulifolius センカクトロロアオイ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 134 | 1/12 (8.3%) | 62/2533 (2.4%) | — |
| CR 絶滅危惧IA類 | Diplomorpha phymatoglossa オオシマガンピ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/4 (0.0%) | 6/561 (1.1%) | — |
| CR 絶滅危惧IA類 | Elaeagnus arakiana タンゴグミ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 6 | 2/77 (2.6%) | 6/92 (6.5%) | — |
| CR 絶滅危惧IA類 | Elaeagnus epitricha クマヤマグミ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 6 | 2/77 (2.6%) | 6/92 (6.5%) | — |
| CR 絶滅危惧IA類 | Viola amamiana アマミスミレ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 7 | 7 | 4/410 (1.0%) | 4/647 (0.6%) | — |
| CR 絶滅危惧IA類 | Viola lactiflora シロコスミレ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 7 | 7 | 4/410 (1.0%) | 4/647 (0.6%) | — |
| CR 絶滅危惧IA類 | Viola okinawensis シマジリスミレ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 7 | 7 | 4/410 (1.0%) | 4/647 (0.6%) | — |
| CR 絶滅危惧IA類 | Viola sp. テリハオリヅルスミレ | — | — | — | — | — | No | — | — | — | 0 | 7 | 7 | 4/410 (1.0%) | 4/647 (0.6%) | — |
| CR 絶滅危惧IA類 | Viola tashiroi var. tairae イシガキスミレ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 7 | 7 | 4/410 (1.0%) | 4/647 (0.6%) | — |
| CR 絶滅危惧IA類 | Trichosanthes homophylla var. ishigakiensis イシガキカラスウリ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 175 | 2/107 (1.9%) | 74/970 (7.6%) | — |
| CR 絶滅危惧IA類 | Zehneria perpusilla var. deltifrons サツマスズメウリ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 175 | 0/55 (0.0%) | 74/970 (7.6%) | — |
| CR 絶滅危惧IA類 | Rotala elatinomorpha ヒメキカシグサ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 23 | 0/20 (0.0%) | 10/410 (2.4%) | — |
| CR 絶滅危惧IA類 | Rotala hippuris ミズスギナ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 23 | 0/20 (0.0%) | 10/410 (2.4%) | — |
| CR 絶滅危惧IA類 | Barringtonia asiatica ゴバンノアシ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/26 (0.0%) | 0/270 (0.0%) | — |
| CR 絶滅危惧IA類 | Melastoma tetramerum var. tetramerum ムニンノボタン | — | ✓ | — | — | — | No | — | — | — | 0 | 5 | 5 | 4/60 (6.7%) | 4/3321 (0.1%) | — |
| CR 絶滅危惧IA類 | Lumnitzera racemosa ヒルギモドキ | LC | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 1.32 Gbp 124 | 2,239 37.2 Mbp | 1 | 2 | 5 | 2/3 (66.7%) | 5/293 (1.7%) | 2022-07-05 |
| CR 絶滅危惧IA類 | Terminalia nitens テリハモモタマナ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 5 | 1/125 (0.8%) | 5/293 (1.7%) | — |
| CR 絶滅危惧IA類 | Epilobium fastigiatoramosum エダウチアカバナ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 6 | 1/113 (0.9%) | 4/472 (0.8%) | — |
| CR 絶滅危惧IA類 | Cornus kousa var. chinensis ヤエヤマヤマボウシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 1 | 6 | 6 | 4/79 (5.1%) | 4/104 (3.8%) | — |
| CR 絶滅危惧IA類 | Angelica cryptotaeniifolia var. cryptotaeniifolia ミヤマノダケ | — | — | — | ✓ | — | No | — | — | — | 0 | 1 | 28 | 1/110 (0.9%) | 19/3101 (0.6%) | — |
| CR 絶滅危惧IA類 | Angelica minamitanii ヒュウガセンキュウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 28 | 1/110 (0.9%) | 19/3101 (0.6%) | — |
| CR 絶滅危惧IA類 | Angelica mukabakiensis オオウバタケニンジン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 28 | 1/110 (0.9%) | 19/3101 (0.6%) | — |
| CR 絶滅危惧IA類 | Angelica saxicola イシヅチボウフウ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 28 | 1/110 (0.9%) | 19/3101 (0.6%) | — |
| CR 絶滅危惧IA類 | Angelica sinanomontana シナノノダケ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 28 | 1/110 (0.9%) | 19/3101 (0.6%) | — |
| CR 絶滅危惧IA類 | Heracleum lanatum subsp. akasimontanum ホソバハナウド | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 3 | 28 | 2/99 (2.0%) | 19/3101 (0.6%) | — |
| CR 絶滅危惧IA類 | Sanicula lamelligera var. wakayamensis キイウマノミツバ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 28 | 2/47 (4.3%) | 19/3101 (0.6%) | — |
| CR 絶滅危惧IA類 | Shortia rotundifolia var. amamiana アマミイワウチワ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/6 (0.0%) | 0/17 (0.0%) | — |
| CR 絶滅危惧IA類 | Moneses uniflora イチゲイチヤクソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 55 | 0/1 (0.0%) | 36/3020 (1.2%) | — |
| CR 絶滅危惧IA類 | Menziesia goyozanense ゴヨウザンヨウラク | — | — | — | — | — | No | — | — | — | 0 | 0 | 55 | 0/1 (0.0%) | 36/3020 (1.2%) | — |
| CR 絶滅危惧IA類 | Pieris koidzumiana リュウキュウアセビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 55 | 0/9 (0.0%) | 36/3020 (1.2%) | — |
| CR 絶滅危惧IA類 | Rhododendron boninense ムニンツツジ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 22 | 55 | 16/791 (2.0%) | 36/3020 (1.2%) | — |
| CR 絶滅危惧IA類 | Rhododendron dilatatum var. satsumense ハヤトミツバツツジ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 22 | 55 | 16/791 (2.0%) | 36/3020 (1.2%) | — |
| CR 絶滅危惧IA類 | Rhododendron eriocarpum var. tawadae センカクツツジ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 22 | 55 | 16/791 (2.0%) | 36/3020 (1.2%) | — |
| CR 絶滅危惧IA類 | Rhododendron keiskei var. hypoglaucum ウラジロヒカゲツツジ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 22 | 55 | 16/791 (2.0%) | 36/3020 (1.2%) | — |
| CR 絶滅危惧IA類 | Rhododendron latoucheae var. amamiense アマミセイシカ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 22 | 55 | 16/791 (2.0%) | 36/3020 (1.2%) | — |
| CR 絶滅危惧IA類 | Vaccinium amamianum ヤドリコケモモ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 17 | 55 | 10/229 (4.4%) | 36/3020 (1.2%) | — |
| CR 絶滅危惧IA類 | Vaccinium sieboldii ナガボナツハゼ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 17 | 55 | 10/229 (4.4%) | 36/3020 (1.2%) | — |
| CR 絶滅危惧IA類 | Myrsine okabeana マルバタイミンタチバナ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 17 | 0/88 (0.0%) | 8/1489 (0.5%) | — |
| CR 絶滅危惧IA類 | Lysimachia liukiuensis ヒメミヤマコナスビ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 17 | 1/167 (0.6%) | 8/1489 (0.5%) | — |
| CR 絶滅危惧IA類 | Lysimachia ohsumiensis ヘツカコナスビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 17 | 1/167 (0.6%) | 8/1489 (0.5%) | — |
| CR 絶滅危惧IA類 | Primula kisoana var. kisoana カッコソウ | — | ✓ | ✓ | — | — | No | — | — | — | 0 | 8 | 17 | 3/373 (0.8%) | 8/1489 (0.5%) | — |
| CR 絶滅危惧IA類 | Primula macrocarpa ヒメコザクラ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 8 | 17 | 3/373 (0.8%) | 8/1489 (0.5%) | — |
| CR 絶滅危惧IA類 | Primula reinii var. myogiensis ミョウギイワザクラ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 8 | 17 | 3/373 (0.8%) | 8/1489 (0.5%) | — |
| CR 絶滅危惧IA類 | Primula reinii var. rhodotricha チチブイワザクラ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 8 | 17 | 3/373 (0.8%) | 8/1489 (0.5%) | — |
| CR 絶滅危惧IA類 | Limonium senkakuense センカクハマサジ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/294 (0.3%) | 2/624 (0.3%) | — |
| CR 絶滅危惧IA類 | Limonium sinense タイワンハマサジ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 2 | 1/294 (0.3%) | 2/624 (0.3%) | — |
| CR 絶滅危惧IA類 | Symplocos boninensis ムニンクロキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/209 (0.5%) | 1/210 (0.5%) | — |
| CR 絶滅危惧IA類 | Symplocos kawakamii ウチダシクロキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/209 (0.5%) | 1/210 (0.5%) | — |
| CR 絶滅危惧IA類 | Ligustrum tamakii トゲイボタ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 65 | 1/45 (2.2%) | 40/595 (6.7%) | — |
| CR 絶滅危惧IA類 | Gardneria liukiuensis リュウキュウホウライカズラ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/4 (0.0%) | 0/254 (0.0%) | — |
| CR 絶滅危惧IA類 | Gardneria shimadai タイワンチトセカズラ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/4 (0.0%) | 0/254 (0.0%) | — |
| CR 絶滅危惧IA類 | Gentiana aquatica ヒナリンドウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 4 | 3/280 (1.1%) | 4/1132 (0.4%) | — |
| CR 絶滅危惧IA類 | Gentiana takushii ミヤココケリンドウ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 4 | 3/280 (1.1%) | 4/1132 (0.4%) | — |
| CR 絶滅危惧IA類 | Excavatia hexandra ホソバヤロード | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Ochrosia iwasakiana シマソケイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 25 | 0/22 (0.0%) | 19/3268 (0.6%) | — |
| CR 絶滅危惧IA類 | Urceola micrantha ゴムカズラ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 25 | 0/7 (0.0%) | 19/3268 (0.6%) | — |
| CR 絶滅危惧IA類 | Cynanchum boudieri アマミイケマ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 25 | 1/149 (0.7%) | 19/3268 (0.6%) | — |
| CR 絶滅危惧IA類 | Dischidia formosana マメヅタカズラ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 25 | 0/31 (0.0%) | 19/3268 (0.6%) | — |
| CR 絶滅危惧IA類 | Vincetoxicum inamoenum エゾノクサタチバナ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 25 | 0/139 (0.0%) | 19/3268 (0.6%) | — |
| CR 絶滅危惧IA類 | Vincetoxicum yonakuniense ヨナグニカモメヅル | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 25 | 0/139 (0.0%) | 19/3268 (0.6%) | — |
| CR 絶滅危惧IA類 | Galium triflorum ヤツガタケムグラ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 7 | 46 | 5/269 (1.9%) | 29/6192 (0.5%) | — |
| CR 絶滅危惧IA類 | Hedyotis auricularia ヤエヤマハシカグサ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 46 | 0/8 (0.0%) | 29/6192 (0.5%) | — |
| CR 絶滅危惧IA類 | Knoxia sumatrensis シソノミグサ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 46 | 1/5 (20.0%) | 29/6192 (0.5%) | — |
| CR 絶滅危惧IA類 | Ophiorrhiza yamashitae アマミアワゴケ | CR | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 46 | 1/102 (1.0%) | 29/6192 (0.5%) | — |
| CR 絶滅危惧IA類 | Polemonium kiushianum ハナシノブ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/30 (0.0%) | 1/416 (0.2%) | — |
| CR 絶滅危惧IA類 | Aniseia martinicensis ナガバアサガオ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 17 | 0/4 (0.0%) | 11/1193 (0.9%) | — |
| CR 絶滅危惧IA類 | Cuscuta australis マメダオシ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Contig, Reference | 263 Mbp 97.6 | 218 3.63 Mbp | 1 | 4 | 17 | 4/190 (2.1%) | 11/1193 (0.9%) | 2018-06-22 |
| CR 絶滅危惧IA類 | Cuscuta europaea クシロネナシカズラ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Contig, Reference | 976 Mbp 41 | 475 17.9 Mbp | 1 | 4 | 17 | 4/190 (2.1%) | 11/1193 (0.9%) | 2022-11-27 |
| CR 絶滅危惧IA類 | Lepistemon binectariferum var. trichocarpum オオバケアサガオ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 17 | 0/0 | 11/1193 (0.9%) | — |
| CR 絶滅危惧IA類 | Cordia aspera subsp. kanehirae トゲミノイヌチシャ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/142 (0.7%) | 1/167 (0.6%) | — |
| CR 絶滅危惧IA類 | Cynoglossum lanceolatum var. formosanum タイワンルリソウ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 8 | 0/39 (0.0%) | 5/1307 (0.4%) | — |
| CR 絶滅危惧IA類 | Ehretia philippinensis リュウキュウチシャノキ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 2 | 1/39 (2.6%) | 1/126 (0.8%) | — |
| CR 絶滅危惧IA類 | Eritrichium nipponicum var. albiflorum エゾルリムラサキ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 8 | 0/17 (0.0%) | 5/1307 (0.4%) | — |
| CR 絶滅危惧IA類 | Hackelia deflexa イワムラサキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 8 | 0/14 (0.0%) | 5/1307 (0.4%) | — |
| CR 絶滅危惧IA類 | Mertensia pterocarpa var. yezoensis エゾルリソウ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 8 | 0/62 (0.0%) | 5/1307 (0.4%) | — |
| CR 絶滅危惧IA類 | Omphalodes prolifera ハイルリソウ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 8 | 0/10 (0.0%) | 5/1307 (0.4%) | — |
| CR 絶滅危惧IA類 | Callicarpa formosana ホウライムラサキ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 81 | 1/74 (1.4%) | 50/4350 (1.1%) | — |
| CR 絶滅危惧IA類 | Callicarpa glabra シマムラサキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 81 | 1/74 (1.4%) | 50/4350 (1.1%) | — |
| CR 絶滅危惧IA類 | Callicarpa longissima タカクマムラサキ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 81 | 1/74 (1.4%) | 50/4350 (1.1%) | — |
| CR 絶滅危惧IA類 | Vitex bicolor ヤエヤマハマゴウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 81 | 0/83 (0.0%) | 50/4350 (1.1%) | — |
| CR 絶滅危惧IA類 | Vitex quinata オオニンジンボク | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 81 | 0/83 (0.0%) | 50/4350 (1.1%) | — |
| CR 絶滅危惧IA類 | Amethystea caerulea ルリハッカ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 81 | 0/1 (0.0%) | 50/4350 (1.1%) | — |
| CR 絶滅危惧IA類 | Coleus formosanus ケサヤバナ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 81 | 0/67 (0.0%) | 50/4350 (1.1%) | — |
| CR 絶滅危惧IA類 | Teucrium veronicoides var. brachytrichum イヌニガクサ | — | — | — | — | — | No | — | — | — | 0 | 2 | 81 | 1/114 (0.9%) | 50/4350 (1.1%) | — |
| CR 絶滅危惧IA類 | Solanum miyakojimense イラブナスビ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 213 | 286 | 60/1066 (5.6%) | 91/2445 (3.7%) | — |
| CR 絶滅危惧IA類 | Euphrasia multifolia var. inaensis イナコゴメグサ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 3 | 13 | 2/110 (1.8%) | 10/1414 (0.7%) | — |
| CR 絶滅危惧IA類 | Euphrasia pectinata var. obtusiserrata エゾノダッタンコゴメグサ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 3 | 13 | 2/110 (1.8%) | 10/1414 (0.7%) | — |
| CR 絶滅危惧IA類 | Pedicularis koidzumiana ベニシオガマ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 13 | 0/421 (0.0%) | 10/1414 (0.7%) | — |
| CR 絶滅危惧IA類 | Rehmannia japonica センリゴマ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 13 | 1/11 (9.1%) | 10/1414 (0.7%) | — |
| CR 絶滅危惧IA類 | Veronicastrum liukiuense リュウキュウスズカケ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 53 | 0/16 (0.0%) | 39/1677 (2.3%) | — |
| CR 絶滅危惧IA類 | Veronicastrum villosulum スズカケソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 53 | 0/16 (0.0%) | 39/1677 (2.3%) | — |
| CR 絶滅危惧IA類 | Hemigraphis okamotoi ミヤコジマソウ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 9 | 0/22 (0.0%) | 4/1915 (0.2%) | — |
| CR 絶滅危惧IA類 | Aeschynanthus acuminatus ナガミカズラ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 6 | 0/64 (0.0%) | 6/2401 (0.2%) | — |
| CR 絶滅危惧IA類 | Lysionotus apicidens タイワンシシンラン | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 6 | 0/35 (0.0%) | 6/2401 (0.2%) | — |
| CR 絶滅危惧IA類 | Titanotrichum oldhamii マツムラソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 6 | 0/1 (0.0%) | 6/2401 (0.2%) | — |
| CR 絶滅危惧IA類 | Orobanche boninsimae シマウツボ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 13 | 1/87 (1.1%) | 10/1414 (0.7%) | — |
| CR 絶滅危惧IA類 | Abelia chinensis var. ionandra タイワンツクバネウツギ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/10 (0.0%) | 5/680 (0.7%) | — |
| CR 絶滅危惧IA類 | Abelia serrata var. tomentosa オニツクバネウツギ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/5 (0.0%) | 5/680 (0.7%) | — |
| CR 絶滅危惧IA類 | Lonicera japonica var. miyagusukiana ヒメスイカズラ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 7 | 2/172 (1.2%) | 5/680 (0.7%) | — |
| CR 絶滅危惧IA類 | Lonicera kurobushiensis クロブシヒョウタンボク | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 7 | 2/172 (1.2%) | 5/680 (0.7%) | — |
| CR 絶滅危惧IA類 | Lonicera uzenensis ウゼンベニバナヒョウタンボク | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 7 | 2/172 (1.2%) | 5/680 (0.7%) | — |
| CR 絶滅危惧IA類 | Triosteum pinnatifidum ホザキツキヌキソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/10 (0.0%) | 5/680 (0.7%) | — |
| CR 絶滅危惧IA類 | Weigela florida オオベニウツギ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/11 (0.0%) | 5/680 (0.7%) | — |
| CR 絶滅危惧IA類 | Patrinia triloba var. kozushimensis シマキンレイカ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 7 | 0/13 (0.0%) | 5/680 (0.7%) | — |
| CR 絶滅危惧IA類 | Adenophora hatsushimae ツクシイワシャジン | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 15 | 1/67 (1.5%) | 11/1542 (0.7%) | — |
| CR 絶滅危惧IA類 | Adenophora palustris ヤチシャジン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 15 | 1/67 (1.5%) | 11/1542 (0.7%) | — |
| CR 絶滅危惧IA類 | Adenophora pereskiifolia var. yamadae ユウバリシャジン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 15 | 1/67 (1.5%) | 11/1542 (0.7%) | — |
| CR 絶滅危惧IA類 | Adenophora stricta トウシャジン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 15 | 1/67 (1.5%) | 11/1542 (0.7%) | — |
| CR 絶滅危惧IA類 | Lobelia chevalieri タチミゾカクシ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 15 | 3/193 (1.6%) | 11/1542 (0.7%) | — |
| CR 絶滅危惧IA類 | Lobelia zeylanica マルバミゾカクシ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 15 | 3/193 (1.6%) | 11/1542 (0.7%) | — |
| CR 絶滅危惧IA類 | Ainsliaea oblonga var. latifolia オオナガバハグマ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 179 | 0/41 (0.0%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Anaphalis sinica var. yakusimensis ヤクシマウスユキソウ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 179 | 0/74 (0.0%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Antennaria dioica エゾノチチコグサ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 179 | 0/40 (0.0%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Aster ujiinsularis オオイソノギク | — | — | — | — | — | No | — | — | — | 0 | 0 | 179 | 0/159 (0.0%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Aster yakushimensis ヤクシマノギク | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 179 | 0/159 (0.0%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Cirsium aidzuense アイズヒメアザミ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 179 | 1/240 (0.4%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Cirsium akimotoi シライワアザミ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 179 | 1/240 (0.4%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Cirsium apoense アポイアザミ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 179 | 1/240 (0.4%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Cirsium japonicum var. australe タカサゴアザミ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 179 | 1/240 (0.4%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Cirsium katoanum ウゼンヒメアザミ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 179 | 1/240 (0.4%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Cirsium lucens var. bracteosum ヘイケモリアザミ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 179 | 1/240 (0.4%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Cirsium masami-saitoanum ヒュウガアザミ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 179 | 1/240 (0.4%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Cirsium nippoense ニッポウアザミ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 179 | 1/240 (0.4%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Conyza aegyptiaca キクバイズハハコ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 3 | 179 | 2/30 (6.7%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Crepidiastrum grandicollum コヘラナレン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 179 | 0/14 (0.0%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Crepidiastrum lanceolatum var. daitoense ダイトウワダン | — | — | — | — | — | No | — | — | — | 0 | 0 | 179 | 0/14 (0.0%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Erigeron miyabeanus ミヤマノギク | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 4 | 179 | 3/185 (1.6%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Lagenophora lanata コケセンボンギク | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 179 | 0/16 (0.0%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Ligularia angusta ヤマタバコ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 179 | 0/97 (0.0%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Parasenecio hastatus subsp. orientalis var. nantaicus ニッコウコウモリ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 179 | 0/52 (0.0%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Saussurea insularis シマトウヒレン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 179 | 2/366 (0.5%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Saussurea mikurasimensis ミクラジマトウヒレン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 179 | 2/366 (0.5%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Saussurea yakusimensis ヤクシマヒゴタイ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 179 | 2/366 (0.5%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Scorzonera rebunensis フタナミソウ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 179 | 0/41 (0.0%) | 102/16211 (0.6%) | — |
| CR 絶滅危惧IA類 | Alisma canaliculatum var. harimense ホソバヘラオモダカ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 2 | 1/11 (9.1%) | 1/142 (0.7%) | — |
| CR 絶滅危惧IA類 | Sagittaria natans カラフトグワイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 2 | 0/44 (0.0%) | 1/142 (0.7%) | — |
| CR 絶滅危惧IA類 | Potamogeton lucens var. teganumensis ガシャモク | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 2 | 1/127 (0.8%) | 1/173 (0.6%) | — |
| CR 絶滅危惧IA類 | Potamogeton obtusifolius イヌイトモ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 2 | 1/127 (0.8%) | 1/173 (0.6%) | — |
| CR 絶滅危惧IA類 | Potamogeton praelongus ナガバエビモ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 2 | 1/127 (0.8%) | 1/173 (0.6%) | — |
| CR 絶滅危惧IA類 | Ruppia occidentalis ヤハズカワツルモ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/23 (0.0%) | 3/40 (7.5%) | — |
| CR 絶滅危惧IA類 | Najas tenuicaulis ヒメイバラモ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/30 (0.0%) | 3/217 (1.4%) | — |
| CR 絶滅危惧IA類 | Sciaphila multiflora イシガキソウ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/18 (0.0%) | 0/29 (0.0%) | — |
| CR 絶滅危惧IA類 | Sciaphila sugimotoi オモトソウ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/18 (0.0%) | 0/29 (0.0%) | — |
| CR 絶滅危惧IA類 | Sciaphila yakushimensis ヤクシマソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/18 (0.0%) | 0/29 (0.0%) | — |
| CR 絶滅危惧IA類 | Anticlea sibirica リシリソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1 | 0/6 (0.0%) | 1/202 (0.5%) | — |
| CR 絶滅危惧IA類 | Chionographis koidzumiana var. kurokamiana クロカミシライトソウ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/4 (25.0%) | 1/202 (0.5%) | — |
| CR 絶滅危惧IA類 | Disporum uniflorum キバナホウチャクソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/19 (0.0%) | 0/296 (0.0%) | — |
| CR 絶滅危惧IA類 | Lilium alexandrae ウケユリ | CR | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 5 | 1/151 (0.7%) | 5/753 (0.7%) | — |
| CR 絶滅危惧IA類 | Lilium callosum var. flaviflorum キバナスゲユリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 5 | 1/151 (0.7%) | 5/753 (0.7%) | — |
| CR 絶滅危惧IA類 | Lilium nobilissimum タモトユリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 5 | 1/151 (0.7%) | 5/753 (0.7%) | — |
| CR 絶滅危惧IA類 | Ophiopogon reversus ヨナグニノシラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 18 | 0/51 (0.0%) | 14/1531 (0.9%) | — |
| CR 絶滅危惧IA類 | Rohdea japonica var. latifolia サツマオモト | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 18 | 0/16 (0.0%) | 14/1531 (0.9%) | — |
| CR 絶滅危惧IA類 | Tofieldia coccinea var. kiusiana ナガエチャボゼキショウ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/13 (0.0%) | 0/22 (0.0%) | — |
| CR 絶滅危惧IA類 | Tricyrtis formosana タイワンホトトギス | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/35 (0.0%) | 5/753 (0.7%) | — |
| CR 絶滅危惧IA類 | Tricyrtis hitra var. masamunei サツマホトトギス | — | — | — | — | — | No | — | — | — | 0 | 0 | 5 | 0/35 (0.0%) | 5/753 (0.7%) | — |
| CR 絶滅危惧IA類 | Dioscorea luzonensis ルゾンヤマノイモ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 11 | 12 | 5/344 (1.5%) | 6/349 (1.7%) | — |
| CR 絶滅危惧IA類 | Dioscorea tabatae ユワンオニドコロ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 11 | 12 | 5/344 (1.5%) | 6/349 (1.7%) | — |
| CR 絶滅危惧IA類 | Dioscorea zentaroana アマミタチドコロ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 11 | 12 | 5/344 (1.5%) | 6/349 (1.7%) | — |
| CR 絶滅危惧IA類 | Iris setosa var. nasuensis ナスヒオウギアヤメ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 7 | 8 | 5/302 (1.7%) | 6/1504 (0.4%) | — |
| CR 絶滅危惧IA類 | Oxygyne hyodoi ヒナノボンボリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/69 (0.0%) | — |
| CR 絶滅危惧IA類 | Oxygyne shinzatoi ホシザキシャクジョウ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/69 (0.0%) | — |
| CR 絶滅危惧IA類 | Oxygyne yamashitae ヤクノヒナホシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/69 (0.0%) | — |
| CR 絶滅危惧IA類 | Juncus decipiens f. filiformis オキナワイ | — | — | — | — | — | No | — | — | — | 0 | 8 | 12 | 3/164 (1.8%) | 5/283 (1.8%) | — |
| CR 絶滅危惧IA類 | Juncus potaninii エゾイトイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 8 | 12 | 3/164 (1.8%) | 5/283 (1.8%) | — |
| CR 絶滅危惧IA類 | Juncus yakeisidakensis ミヤマゼキショウ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 8 | 12 | 3/164 (1.8%) | 5/283 (1.8%) | — |
| CR 絶滅危惧IA類 | Eriocaulon amanoanum アマノホシクサ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/153 (0.7%) | 1/501 (0.2%) | — |
| CR 絶滅危惧IA類 | Eriocaulon perplexum エゾイヌノヒゲ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/153 (0.7%) | 1/501 (0.2%) | — |
| CR 絶滅危惧IA類 | Eriocaulon seticuspe ヒュウガホシクサ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/153 (0.7%) | 1/501 (0.2%) | — |
| CR 絶滅危惧IA類 | Eriocaulon truncatum スイシャホシクサ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/153 (0.7%) | 1/501 (0.2%) | — |
| CR 絶滅危惧IA類 | Calamagrostis autumnalis キリシマノガリヤス | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1006 | 0/100 (0.0%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Digitaria mollicoma ビロードメヒシバ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 1006 | 3/82 (3.7%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Elymus koryoensis タイシャクカモジ | — | — | — | — | — | No | — | — | — | 0 | 1 | 1006 | 1/155 (0.6%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Elymus sibiricus エゾムギ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Chromosome, Reference | 6.90 Gbp 30.35 | 418 49.5 Mbp | 1 | 1 | 1006 | 1/155 (0.6%) | 158/8700 (1.8%) | 2024-05-20 |
| CR 絶滅危惧IA類 | Elymus tsukushiensis var. tsukushiensis オニカモジ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 1006 | 0/10 (0.0%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Isachne lutchuensis ケナシハイチゴザサ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1006 | 0/18 (0.0%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Isachne myosotis ヒメハイチゴザサ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1006 | 0/18 (0.0%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Ischaemum indicum ヒメカモノハシ | LC | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 1006 | 0/1 (0.0%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Panicum paludosum オオヌカキビ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 41 | 1006 | 4/182 (2.2%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Piptatherum kuoi イネガヤ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 1006 | 0/35 (0.0%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Poa glauca var. kitadakensis キタダケイチゴツナギ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 7 | 1006 | 6/373 (1.6%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Sacciolepis myosuroides ハラヌメリ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1006 | 0/13 (0.0%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Schizachne purpurascens subsp. callosa フォーリーガヤ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 1006 | 0/2 (0.0%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Sorghum nitidum コモロコシガヤ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 26 | 1006 | 1/37 (2.7%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Sporobolus hancei ヒメネズミノオ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 1006 | 2/172 (1.2%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Thaumastochloa cochinchinensis ヒメウシノシッペイ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 1006 | 0/2 (0.0%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Torreyochloa natans ホソバドジョウツナギ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 1006 | 0/1 (0.0%) | 158/8700 (1.8%) | — |
| CR 絶滅危惧IA類 | Nypa fruticans ニッパヤシ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 21 | 0/1 (0.0%) | 9/2323 (0.4%) | — |
| CR 絶滅危惧IA類 | Arisaema aprile オドリコテンナンショウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Arisaema cucullatum ホロテンナンショウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Arisaema heterocephalum subsp. majus オオアマミテンナンショウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Arisaema heterocephalum subsp. okinawense オキナワテンナンショウ | — | — | — | — | — | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Arisaema inaense イナヒロハテンナンショウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Arisaema ishizuchiense subsp. ishizuchiense イシヅチテンナンショウ | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Arisaema kawashimae トクノシマテンナンショウ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Arisaema kuratae アマギテンナンショウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Arisaema longipedunculatum var. yakumontanum ヤクシマヒロハテンナンショウ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Arisaema minamitanii ヒュウガヒロハテンナンショウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Arisaema nagiense ナギヒロハテンナンショウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Arisaema ogatae オガタテンナンショウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Arisaema seppikoense セッピコテンナンショウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/149 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Pothos chinensis ユズノハカズラ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/9 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Rhaphidophora kortharthii サキシマハブカズラ | — | — | — | — | — | No | — | — | — | 0 | 0 | 26 | 0/45 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Rhaphidophora liukiuensis ヒメハブカズラ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 26 | 0/45 (0.0%) | 12/1768 (0.7%) | — |
| CR 絶滅危惧IA類 | Pandanus daitoensis ホソミアダン | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/196 (0.5%) | 1/291 (0.3%) | — |
| CR 絶滅危惧IA類 | Carex aequialta トダスゲ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex arisanensis アリサンタマツリスゲ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex collifera リュウキュウヒエスゲ | CR | — | — | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex disperma ホソスゲ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex filipes var. kuzakaiensis オクタマツリスゲ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex globularis トナカイスゲ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex hoozanensis ホウザンスゲ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex kabanovii ヤリスゲ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex kagoshimensis セトウチスゲ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex laevissima ヒメミコシガヤ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex lehmannii センジョウスゲ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex longistipes タイワンカンスゲ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex omiana var. yakushimana チャボカワズスゲ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex planiculmis var. urasawae チチブシラスゲ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex rhynchachaenium トックリスゲ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex rostrata var. borealis ヌマスゲ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 2 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex rotundata コヌマスゲ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex scita var. parvisquama ダイセンアシボソスゲ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Carex yasuii ムニンヒョウタンスゲ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 36 | 60 | 21/1654 (1.3%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Cyperus digitatus オオホウキガヤツリ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 60 | 3/356 (0.8%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Cyperus distans ホウキガヤツリ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 60 | 3/356 (0.8%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Cyperus niigatensis ニイガタガヤツリ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 5 | 60 | 3/356 (0.8%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Cyperus nutans var. subprolixus ヒメホウキガヤツリ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 60 | 3/356 (0.8%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Cyperus unioloides ムギガラガヤツリ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 60 | 3/356 (0.8%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Eleocharis atropurpurea クロミノハリイ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 60 | 2/184 (1.1%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Eleocharis retroflexa subsp. chaetaria カヤツリマツバイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 60 | 2/184 (1.1%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Eleocharis tetraquetra var. tsurumachii カドハリイ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 3 | 60 | 2/184 (1.1%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Eriophorum scheuchzeri var. tenuifolium エゾワタスゲ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 60 | 1/15 (6.7%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Fimbristylis fimbristyloides トモエバテンツキ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 60 | 0/66 (0.0%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Fimbristylis kadzusana イッスンテンツキ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 60 | 0/66 (0.0%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Fimbristylis nutans ウナヅキテンツキ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 60 | 0/66 (0.0%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Isolepis crassiuscula ビャッコイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 60 | 0/66 (0.0%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Remirea maritima コウシュンスゲ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 5 | 60 | 3/356 (0.8%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Schoenus calostachyus イヘヤヒゲクサ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 60 | 0/131 (0.0%) | 37/3532 (1.0%) | — |
| CR 絶滅危惧IA類 | Acanthephippium pictum エンレイショウキラン | — | — | — | ✓ | — | No | — | — | — | 0 | 0 | 29 | 0/4 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Acanthephippium sylhetense タイワンショウキラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/4 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Androcorys pusillus ミスズラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/51 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Anoectochilus formosanus キバナシュスラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/40 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Anoectochilus koshunensis コウシュンシュスラン | DD | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/40 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Bulbophyllum affine クスクスラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/697 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Bulbophyllum macraei var. tanegashimense タネガシマシコウラン | — | — | — | — | — | No | — | — | — | 0 | 0 | 29 | 0/697 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Calanthe alpina var. schlechteri キソエビネ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/77 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Calanthe amamiana アマミエビネ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/77 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Calanthe davidii タガネラン | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/77 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Calanthe densiflora タマザキエビネ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/77 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Calanthe hoshii ホシツルラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/77 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Calanthe mannii サクラジマエビネ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/77 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Cheirostylis takeoi アリサンムヨウラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/19 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Cremastra aphylla モイワラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/4 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Crepidium purpureum オキナワヒメラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/28 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Cryptostylis arachnites オオスズムシラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/6 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Cryptostylis taiwaniana タカオオオスズムシラン | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/6 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Cymbidium dayanum var. leachianum ヘツカラン | — | — | — | ✓ | — | No | — | — | — | 0 | 2 | 29 | 2/110 (1.8%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Cymbidium ensifolium スルガラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 29 | 2/110 (1.8%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Cymbidium koran コラン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 29 | 2/110 (1.8%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Cymbidium sinense ホウサイラン | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Chromosome, Reference | 3.53 Gbp 121 | 8,496 1.11 Mbp | 1 | 2 | 29 | 2/110 (1.8%) | 23/11639 (0.2%) | 2022-01-12 |
| CR 絶滅危惧IA類 | Cypripedium guttatum チョウセンキバナアツモリソウ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/67 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Cypripedium macranthos var. macranthos ホテイアツモリ | — | ✓ | — | — | — | No | — | — | — | 0 | 0 | 29 | 0/67 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Cypripedium shanxiense ドウトウアツモリソウ | NT | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/67 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Didymoplexiella siamensis コカゲラン | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Dienia ophrydis ホザキヒメラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/6 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Diploprora championii サガリラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/2 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Disperis neilgherrensis ジョウロウラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/32 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Epipogium japonicum アオキラン | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/2 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Erythrodes blumei ホソフデラン | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/8 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Erythrorchis altissima タカツルラン | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/2 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Eulophia taiwanensis タカサゴヤガラ | EN | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/76 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Gastrochilus ciliaris マツゲカヤラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/58 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Gastrodia albida ヤクシマヤツシロラン | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 29 | 1/27 (3.7%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Gastrodia elata var. pallens シロテンマ | — | — | — | ✓ | ✓ | No | — | — | — | 2 | 2 | 29 | 1/27 (3.7%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Gastrodia shimizuana ナンゴクヤツシロラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 29 | 1/27 (3.7%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Goodyera fumata ヤブミョウガラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/61 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Hancockia uniflora ヒメクリソラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/1 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Herminium monorchis クシロチドリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/51 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Hetaeria oblongifolia オオカゲロウラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/10 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Heterozeuxine nervosa オオキヌラン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0 | 0 | — |
| CR 絶滅危惧IA類 | Lecanorchis flavicans var. flavicans サキシマスケロクラン | — | ✓ | — | — | — | No | — | — | — | 0 | 0 | 29 | 0/14 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Lecanorchis japonica var. tubiformis ヤエヤマスケロクラン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/14 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Lecanorchis nigricans var. yakusimensis ヤクムヨウラン | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/14 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Lecanorchis trachycaula アワムヨウラン | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/14 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Lecanorchis virella ミドリムヨウラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/14 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Liparis hostifolia シマクモキリソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/141 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Liparis nigra var. sootenzanensis キバナコクラン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/141 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Liparis nikkoensis ヒメスズムシソウ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/141 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Liparis truncata クモイジガバチ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/141 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Liparis viridiflora コゴメキノエラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/141 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Macodes petola ナンバンカモメラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/4 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Malaxis boninensis シマホザキラン | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/38 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Myrmechis tsukusiana ツクシアリドオシラン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/5 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Neottia furusei カイサカネラン | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/42 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Oberonia makinoi オオバヨウラクラン | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/64 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Odontochilus hatusimanus ハツシマラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/15 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Orchis graminifolia var. kurokamiana クロカミラン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/28 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Orchis graminifolia var. suzukiana アワチドリ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/51 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Oreorchis itoana コハクラン | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/11 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Peristylus calcaratus ヒゲナガトンボ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/30 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Peristylus lacertifer タコガタサギソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/30 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Phaius mishmensis ヒメカクラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/20 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Platanthera hondoensis オオバナオオヤマサギソウ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 29 | 2/117 (1.7%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Platanthera mandarinorum subsp. hachijoensis var. masamunei ヤクシマトンボ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 29 | 2/117 (1.7%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Platanthera okuboi ハチジョウツレサギ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 29 | 2/117 (1.7%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Platanthera sonoharae クニガミトンボソウ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 2 | 29 | 2/117 (1.7%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Platanthera stenoglossa subsp. hottae ソハヤキトンボソウ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 2 | 29 | 2/117 (1.7%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Pristiglottis rubricentra ヒメシラヒゲラン | — | — | — | — | — | No | — | — | — | 0 | 0 | 29 | 0/3 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Thrixspermum fantasticum ハガクレナガミラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/52 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Thrixspermum saruwatarii ケイタオフウラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 29 | 0/52 (0.0%) | 23/11639 (0.2%) | — |
| CR 絶滅危惧IA類 | Lycopodium carolinianum イヌヤチスギラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/3 (0.0%) | 2/328 (0.6%) | — |
| CR 絶滅危惧IA類 | Lycopodium fargesii ヒモスギラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/189 (0.0%) | 2/328 (0.6%) | — |
| CR 絶滅危惧IA類 | Lycopodium laxum ボウカズラ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/10 (0.0%) | 2/328 (0.6%) | — |
| CR 絶滅危惧IA類 | Lycopodium salvinioides ヒメヨウラクヒバ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/10 (0.0%) | 2/328 (0.6%) | — |
| CR 絶滅危惧IA類 | Lycopodium sieboldii var. christensenianum リュウキュウヒモラン | — | ✓ | — | — | — | No | — | — | — | 0 | 0 | 3 | 0/189 (0.0%) | 2/328 (0.6%) | — |
| CR 絶滅危惧IA類 | Lycopodium somae コスギトウゲシバ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 3 | 0/68 (0.0%) | 2/328 (0.6%) | — |
| CR 絶滅危惧IA類 | Equisetum variegatum チシマヒメドクサ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/36 (0.0%) | 0/37 (0.0%) | — |
| CR 絶滅危惧IA類 | Botrychium lanceolatum ミヤマハナワラビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/66 (0.0%) | 0/143 (0.0%) | — |
| CR 絶滅危惧IA類 | Botrychium microphyllum イブリハナワラビ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/16 (0.0%) | 0/143 (0.0%) | — |
| CR 絶滅危惧IA類 | Angiopteris fokiensis ヒノタニリュウビンタイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/40 (0.0%) | 0/155 (0.0%) | — |
| CR 絶滅危惧IA類 | Callistopteris apiifolia キクモバホラゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/448 (0.0%) | — |
| CR 絶滅危惧IA類 | Cephalomanes atrovirens サキシマホラゴケ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/448 (0.0%) | — |
| CR 絶滅危惧IA類 | Didymoglossum bimarginatum マルバコケシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/35 (0.0%) | 0/448 (0.0%) | — |
| CR 絶滅危惧IA類 | Plagiogyria stenoptera シマヤマソテツ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/19 (0.0%) | 0/19 (0.0%) | — |
| CR 絶滅危惧IA類 | Lindsaea ensifolia イヌイノモトソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/150 (0.0%) | 0/199 (0.0%) | — |
| CR 絶滅危惧IA類 | Lindsaea kawabatae シノブホングウシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/150 (0.0%) | 0/199 (0.0%) | — |
| CR 絶滅危惧IA類 | Odontosoria minutula コビトホラシノブ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/24 (0.0%) | 0/199 (0.0%) | — |
| CR 絶滅危惧IA類 | Odontosoria yaeyamensis ヤエヤマホラシノブ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/24 (0.0%) | 0/199 (0.0%) | — |
| CR 絶滅危惧IA類 | Antrophyum formosanum シマタキミシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/37 (0.0%) | 3/1167 (0.3%) | — |
| CR 絶滅危惧IA類 | Coniogramme gracilis ホソバイワガネソウ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/27 (0.0%) | 3/1167 (0.3%) | — |
| CR 絶滅危惧IA類 | Haplopteris forrestiana オオバシシラン | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/47 (0.0%) | 3/1167 (0.3%) | — |
| CR 絶滅危惧IA類 | Haplopteris mediosora イトシシラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/47 (0.0%) | 3/1167 (0.3%) | — |
| CR 絶滅危惧IA類 | Pteris formosana タイワンアマクサシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/254 (0.0%) | 3/1167 (0.3%) | — |
| CR 絶滅危惧IA類 | Pteris grevilleana アシガタシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/254 (0.0%) | 3/1167 (0.3%) | — |
| CR 絶滅危惧IA類 | Pteris kawabatae カワバタハチジョウシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/254 (0.0%) | 3/1167 (0.3%) | — |
| CR 絶滅危惧IA類 | Microlepia obtusiloba var. angustata ホソバコウシュンシダ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/44 (0.0%) | 0/173 (0.0%) | — |
| CR 絶滅危惧IA類 | Acystopteris tenuisecta ホウライウスヒメワラビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/35 (0.0%) | — |
| CR 絶滅危惧IA類 | Asplenium castaneoviride ヤマドリトラノオ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/453 (0.0%) | 0/503 (0.0%) | — |
| CR 絶滅危惧IA類 | Asplenium ensiforme ホコガタシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/453 (0.0%) | 0/503 (0.0%) | — |
| CR 絶滅危惧IA類 | Asplenium griffithianum フササジラン | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/453 (0.0%) | 0/503 (0.0%) | — |
| CR 絶滅危惧IA類 | Hymenasplenium cardiophyllum ヒメタニワタリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/48 (0.0%) | 0/503 (0.0%) | — |
| CR 絶滅危惧IA類 | Hymenasplenium subnormale ウスイロホウビシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/48 (0.0%) | 0/503 (0.0%) | — |
| CR 絶滅危惧IA類 | Woodsia subcordata キタダケデンダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/25 (0.0%) | 0/41 (0.0%) | — |
| CR 絶滅危惧IA類 | Athyrium arisanense タイワンアリサンイヌワラビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/127 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Athyrium kenzo-satakei シビイヌワラビ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/127 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Athyrium masamunei ヤクイヌワラビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/127 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Athyrium neglectum subsp. australe シイバサトメシダ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/127 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Athyrium otophorum var. okanum ヤマグチタニイヌワラビ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/127 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Athyrium silvicola タカサゴイヌワラビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/127 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Athyrium spinescens トゲヤマイヌワラビ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/127 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Athyrium tozanense シマイヌワラビ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/127 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Athyrium yakusimense ヤクシマタニイヌワラビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/127 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Deparia formosana ジャコウシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/70 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Deparia minamitanii ヒュウガシケシダ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/70 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Diplazium kawakamii アオイガワラビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/240 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Diplazium megaphyllum ムシャシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/240 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Diplazium pin-faense フクレギシダ | — | ✓ | ✓ | — | — | No | — | — | — | 0 | 0 | 0 | 0/240 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Diplazium subtripinnatum ムニンミドリシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/240 (0.0%) | 0/444 (0.0%) | — |
| CR 絶滅危惧IA類 | Thelypteris erubescens タイヨウシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/636 (0.0%) | — |
| CR 絶滅危惧IA類 | Thelypteris gracilescens シマヤワラシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/8 (0.0%) | 0/636 (0.0%) | — |
| CR 絶滅危惧IA類 | Hypodematium fordii リュウキュウキンモウワラビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/28 (0.0%) | 0/31 (0.0%) | — |
| CR 絶滅危惧IA類 | Arachniodes cantilenae イツキカナワラビ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/99 (0.0%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Arachniodes chinensis ツルダカナワラビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/99 (0.0%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Arachniodes hiugana ヒュウガカナワラビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/99 (0.0%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Arachniodes oohorae アタシカカナワラビ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/99 (0.0%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Arachniodes simulans ヒゴカナワラビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/99 (0.0%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Cyrtomium macrophyllum var. microindusium クマヤブソテツ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/23 (0.0%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Dryopteris anadroma (in schedule) ムカシベニシダ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/419 (0.2%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Dryopteris anthracinisquama クマイワヘゴ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/419 (0.2%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Dryopteris ebinoensis エビノオオクジャク | — | ✓ | — | — | — | No | — | — | — | 0 | 1 | 4 | 1/419 (0.2%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Dryopteris gymnosora var. angustata ホソバヌカイタチシダ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/419 (0.2%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Dryopteris hangchowensis キリシマイワヘゴ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/419 (0.2%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Dryopteris labordei var. purpurascens ムラサキベニシダ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/419 (0.2%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Dryopteris lunanensis オオミネイワヘゴ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/419 (0.2%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Dryopteris tsugiwoi マルバヌカイタチシダモドキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/419 (0.2%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Dryopteris tsutsuiana ツツイイワヘゴ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/419 (0.2%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Dryopteris wallichiana オオヤグルマシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/419 (0.2%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Elaphoglossum callifolium オキナワアツイタ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/257 (0.4%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Polystichum fibrillosopaleaceum var. marginale スルガイノデ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/252 (0.4%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Polystichum grandifrons キュウシュウイノデ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/252 (0.4%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Polystichum lachenense タカネシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/252 (0.4%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Polystichum obae アマミデンダ | CR | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/252 (0.4%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Polystichum piceopaleaceum サクラジマイノデ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/252 (0.4%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Polystichum shimurae シムライノデ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 4 | 1/252 (0.4%) | 4/1410 (0.3%) | — |
| CR 絶滅危惧IA類 | Lomariopsis spectabilis ツルキジノオ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/65 (0.0%) | 0/71 (0.0%) | — |
| CR 絶滅危惧IA類 | Arthropteris palisotii ワラビツナギ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/14 (0.0%) | 0/202 (0.0%) | — |
| CR 絶滅危惧IA類 | Tectaria fauriei コモチナナバケシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/162 (0.0%) | 0/202 (0.0%) | — |
| CR 絶滅危惧IA類 | Tectaria kusukusensis ナガバウスバシダ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/162 (0.0%) | 0/202 (0.0%) | — |
| CR 絶滅危惧IA類 | Aglaomorpha coronans カザリシダ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/10 (0.0%) | 0/1337 (0.0%) | — |
| CR 絶滅危惧IA類 | Drynaria roosii ハカマウラボシ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/25 (0.0%) | 0/1337 (0.0%) | — |
| CR 絶滅危惧IA類 | Goniophlebium amamianum アマミアオネカズラ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/17 (0.0%) | 0/1337 (0.0%) | — |
| CR 絶滅危惧IA類 | Lemmaphyllum pyriforme オニマメヅタ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/7 (0.0%) | 0/1337 (0.0%) | — |
| CR 絶滅危惧IA類 | Lepisorus oligolepidus ウロコノキシノブ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/86 (0.0%) | 0/1337 (0.0%) | — |
| CR 絶滅危惧IA類 | Leptochilus decurrens オキノクリハラン | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/101 (0.0%) | 0/1337 (0.0%) | — |
| CR 絶滅危惧IA類 | Oreogrammitis nipponica ヒロハヒメウラボシ | — | — | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/74 (0.0%) | 0/1337 (0.0%) | — |
| CR 絶滅危惧IA類 | Pyrrosia adnascens ヒトツバマメヅタ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/74 (0.0%) | 0/1337 (0.0%) | — |
| CR 絶滅危惧IA類 | Pyrrosia linearifolia var. heterolepis タイワンビロードシダ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/74 (0.0%) | 0/1337 (0.0%) | — |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Flavopunctelia flaventior (Stirt.) Hale ハクテンヒメキウメノキゴケ | — | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 33.4 Mbp 23 | 2,554 18.5 kbp | 1 | 1 | 89 | 1/6 (16.7%) | 74/1688 (4.4%) | 2024-09-21 |
| CR 絶滅危惧IA類 | Ramalina yokotae Kashiw. & K.H.Moon ヨコタカラタチゴケ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 9 | 19 | 9/168 (5.4%) | 19/608 (3.1%) | — |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Heteroconger polyzona ゼブラアナゴ | LC | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 4 | 0/7 (0.0%) | 2/301 (0.7%) | — |
| CR 絶滅危惧IA類 | Thryssa baelama オオイワシ | LC | ✓ | ✓ | ✓ | ✓ | Yes (1) | Scaffold, Reference | 884 Mbp 60 | 617,217 2.34 kbp | 1 | 1 | 11 | 1/40 (2.5%) | 9/245 (3.7%) | 2024-08-05 |
| CR 絶滅危惧IA類 | Plectropomus areolatus オオアオノメアラ | VU | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 3 | 41 | 1/9 (11.1%) | 29/494 (5.9%) | — |
| CR 絶滅危惧IA類 | Epinephelus lanceolatus タマカイ | DD | ✓ | ✓ | ✓ | ✓ | Yes (3) | Chromosome, Reference | 1.09 Gbp 133 | 22,225 160 kbp | 3 | 17 | 41 | 12/135 (8.9%) | 29/494 (5.9%) | 2019-05-13 |
| CR 絶滅危惧IA類 | Epinephelus tukula カスリハタ | LC | ✓ | ✓ | ✓ | ✓ | Yes (1) | Chromosome, Reference | 1.13 Gbp 98 | 2,268 5.37 Mbp | 1 | 17 | 41 | 12/135 (8.9%) | 29/494 (5.9%) | 2021-12-09 |
| CR 絶滅危惧IA類 | Chromileptes altivelis サラサハタ | DD | ✓ | ✓ | ✓ | ✓ | Yes (2) | Chromosome, Reference | 1.01 Gbp 114.26 | 283 18.3 Mbp | 2 | 2 | 41 | 1/1 (100.0%) | 29/494 (5.9%) | 2020-05-21 |
| CR 絶滅危惧IA類 | Eleutherochir opercularis オオクチヌメリ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 9 | 0/2 (0.0%) | 5/130 (3.8%) | — |
| CR 絶滅危惧IA類 | Eleutherochir mccaddeni クシヒゲヌメリ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 0 | 9 | 0/2 (0.0%) | 5/130 (3.8%) | — |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Octolasmis unguisiformis メナガオサガニハサミエボシ | — | ✓ | — | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/10 (0.0%) | 0/27 (0.0%) | — |
| CR 絶滅危惧IA類 | Halosbaena daitoensis ダイトウコオイエビ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/12 (0.0%) | 0/12 (0.0%) | — |
| CR 絶滅危惧IA類 | Alpheus hoplocheles フタツトゲテッポウエビ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/323 (0.0%) | 0/901 (0.0%) | — |
| CR 絶滅危惧IA類 | Calliasmata pholidota イラウモエビ | — | ✓ | ✓ | ✓ | — | No | — | — | — | 0 | 0 | 0 | 0/2 (0.0%) | 0/10 (0.0%) | — |
| CR 絶滅危惧IA類 | Catoptrus iejima イエジマガマガザミ | — | — | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 11 | 0/3 (0.0%) | 5/521 (1.0%) | — |
| CR 絶滅危惧IA類 | Neoeriocheir leptognathus ヒメモクズガニ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 5 | 0/1 (0.0%) | 1/119 (0.8%) | — |
| CR 絶滅危惧IA類 | Deiratonotus kaoriae クマノエミオスジガニ | — | ✓ | — | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/3 (0.0%) | 0/12 (0.0%) | — |
| CR 絶滅危惧IA類 | Paraleptuca boninensis オガサワラベニシオマネキ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 0 | 0 | 0/4 (0.0%) | 0/132 (0.0%) | — |
| Conservation Status in the Japanese Red List | Taxon Name 分類群の和名 | Status in the IUCN Red List | Taxonomy entry | Genome sequenced and assembled? (number of assemblies) | Selected assembly | Number of sequenced genomes ゲノムの数 | Number of species with sequenced genomes | Earliest sequenced genome release date | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCBI | iNat | GBIF | COL | Assembly level, RefSeq category | Genome length, coverage | Number of contigs, contig N50 | Species 種 | Genus 属 | Family 科 | Genus 属 | Family 科 | |||||
| CR 絶滅危惧IA類 | Lingula adamsi オオシャミセンガイ | — | ✓ | ✓ | ✓ | ✓ | No | — | — | — | 0 | 1 | 1 | 1/19 (5.3%) | 1/41 (2.4%) | — |